Swingsia samuiensis: E3D00_02310
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Entry
E3D00_02310 CDS
T06080
Name
(GenBank) rRNA cytosine-C5-methylase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssam03009
]
E3D00_02310
Enzymes [BR:
ssam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
E3D00_02310
Ribosome biogenesis [BR:
ssam03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
E3D00_02310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
FtsJ
Methyltransf_25
Methyltransf_31
RrnaAD
Cons_hypoth95
MTS
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QDH16536
UniProt:
A0A4Y6UJ89
LinkDB
All DBs
Position
complement(481298..482650)
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AA seq
450 aa
AA seq
DB search
MTNNKQPHEKKRVKKTDAPRKNGRRPHGGKGHRPPADPTRDLAFDIVCGVVEHRRMLETT
LDRAEKMDARDRASAHRLAATTLRYLGSMTEILQPMLRREPPEPVRCALLLGVAQLLHLE
TPPHAAVGTIVDLLRRRGLAPFAGLANAVLRRVAREGQSLLEGLDQDRLDVPPWLWSAWG
ARARAISRGLHREAPLDLTYRPGRSPVDEEGIEKEVLPTGSVRYPAGTRMSAVAGFEEGD
FWAQDVAASMPVKLMGPLQDKTVVDLCAAPGGKTAQLATAKAKVTAVERDEHRAVRLREN
ITRLGLDVRTVVADGIKWRPDNPVDAVLLDAPCSATGTLRRHPDVLWIKRPRDIVSLTEG
QDAFIEAAHQMLKPGGVLLYAVCSLQDEEGPDRIKAALKKGGWTHKPFTEEELFDMSVAL
TPDGFFRTHPGMWLEKGGMDGFFAARLIKE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaacaagcaaccgcacgagaaaaaacgagtgaaaaaaacggacgcaccacgc
aaaaatggacgccgacctcacggggggaaggggcaccgtcctccggcagacccgacaaga
gatttggcatttgatattgtatgtggtgttgtagaacatcgacggatgttggagacgacg
cttgatcgtgcggagaaaatggatgctcgagatcgggcttctgcacatcgtttggcggca
acaacgttgcgttatttggggagcatgaccgaaattctacagcccatgctgcgcagggag
cccccagagccggttcgatgtgcattgcttttgggggtggcgcagttattgcaccttgaa
acaccacctcatgcggctgttggaacaattgttgatttgctgcgtcggcggggattagct
ccttttgcaggtttggcgaatgcggttttgcgtcgtgtggcgcgtgaaggccaatcatta
ttagagggcttggatcaagaccgactggatgtgccgccatggttatggagtgcgtggggg
gcacgcgcgcgggcgatttcgcgcgggctacaccgggaagctcctctggatttaacgtat
cgtccagggcggtcccctgttgatgaggaaggaatcgagaaagaagttcttcctacgggg
agtgttcgttacccggcagggacgcgtatgagtgcagtggctggttttgaggaaggggat
ttttgggcgcaggatgttgctgcgtcaatgcctgtgaagctgatgggaccactgcaagac
aagacggtggtggatttgtgtgcagcccctggagggaaaacggcacaattggcaacggcg
aaggcaaaagtgaccgctgttgaacgtgatgagcatagagcggtacgcttgcgtgaaaat
ataacacggttggggttggatgtgcgaaccgttgttgcggacgggataaagtggcgtcca
gacaaccctgtggatgcggttttgttggatgcgccgtgctctgctacaggaactttgcgc
cgacacccggatgttttgtggataaaacgaccacgggatattgtgtctctgacagaaggt
caggatgcgtttattgaggctgctcatcaaatgttaaagcccggtggagtattgctgtat
gctgtttgctccttacaggatgaggaaggccccgaccgcattaaggcagctctgaagaaa
gggggatggacacataaacctttcaccgaagaagaattgttcgatatgtccgttgccctc
acacccgatggtttttttcggactcatcctgggatgtggttggaaaaaggcggtatggac
gggttttttgcggctcgtttaattaaagaatga
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