Streptococcus suis BM407 (serotype 2): SSUBM407_1534
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Entry
SSUBM407_1534 CDS
T00935
Symbol
hlpA
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ssb
Streptococcus suis BM407 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssb03032
]
SSUBM407_1534 (hlpA)
03036 Chromosome and associated proteins [BR:
ssb03036
]
SSUBM407_1534 (hlpA)
03400 DNA repair and recombination proteins [BR:
ssb03400
]
SSUBM407_1534 (hlpA)
DNA replication proteins [BR:
ssb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SSUBM407_1534 (hlpA)
Chromosome and associated proteins [BR:
ssb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SSUBM407_1534 (hlpA)
DNA repair and recombination proteins [BR:
ssb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SSUBM407_1534 (hlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
DUF2190
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
CAZ56391
UniProt:
A0A0H3N5M9
LinkDB
All DBs
Position
complement(1612148..1612423)
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AA seq
91 aa
AA seq
DB search
MANKQDLIAKVAEATSLTKKDSAAAVDAVFGAVADYLAAGEKVQLIGFGNFEVRERSART
GRNPQTGAEIKIAASKVPAFKAGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaataaacaagatttgattgcaaaagttgcagaagcaacttcattgactaaaaaa
gactcagcagcagctgttgatgcagtattcggagcagtagcagactaccttgcagctggt
gaaaaagtacaattgatcggtttcggtaactttgaagttcgtgagcgttcagcacgtaca
ggccgcaaccctcaaacaggtgcagaaatcaaaatcgcagcatctaaagtacctgctttc
aaagctggtaaagcacttaaagacgctgtaaaataa
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