Sus scrofa (pig): 100155341
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Entry
100155341 CDS
T01009
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100155341 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100155341 (NEIL1)
Enzymes [BR:
ssc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
100155341 (NEIL1)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100155341 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
100155341
NCBI-ProteinID:
XP_001924578
Ensembl:
ENSSSCG00000001882
UniProt:
A0A4X1TT87
A0A8D1CQV2
LinkDB
All DBs
Position
7:complement(58261761..58269001)
Genome browser
AA seq
389 aa
AA seq
DB search
MPEGPELHLASHFVNEACGELVFGGCVEKSPVSRNPEVPFESSAYHISALARGKELRLTL
SPLPGAQPPQEPLALVFRFGMTGSFQLVPRDALPPHAHLRFYTAPPSPQLALCFVDIRRF
GRWELGGEWDPGRGPCVLLEYEQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA
EILHRLRIPPFEKARTVLEALQRHRLSPELTLSQKIKAKLQNPDLLELCHSVPKEVVQLG
GKGYGPESREEDFAAFRAWLRCYGTPGMNSLRDRHGRTIWFQGDPGPLAPKGGKSRKKKS
KGAQQGPEDRVEDPTLQNKATLRTRRTQRGLEQSTAQQPKGTSLQQDPETPLVPEKGKRR
RRQATSGRRRPQKITGDTPSLEPEGTSAS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggccctgagctgcatctggccagccactttgtgaacgaagcatgcggggag
ctggtgtttggcgggtgtgtggagaagtcacctgtcagccgcaaccctgaggtgccattt
gagagcagtgcctaccacatctcagccctggcccgaggcaaggagctgcgcctgacgctg
agccccctgcctggggcccagcccccacaggagccattggcccttgtcttccgctttggc
atgaccggctccttccagctggtgcccagagatgcactgccgccccatgcccatctgcgc
ttttacacggctccacccagcccccaacttgccctctgcttcgtggacatccgtcgcttt
ggccgctgggaacttggaggcgagtgggatccaggccgtgggccgtgtgttctgctggag
tatgagcagttcagggagaatgtgttacgaaacctagcagacaaggcctttgaccggccc
atttgtgaggccctcttggaccagaggttcttcaatggcattggcaactatctgcgggca
gagatcctacaccggctgaggatacccccctttgagaaggcccgcacggttctggaggca
ctgcagcggcacaggctgagtccggagctgaccctgagccagaagatcaaggccaagctg
cagaacccagacctgctggagctgtgccactcagtgcccaaggaagtggtccagcttggg
ggcaaaggctatgggccggagagcagggaggaggactttgctgccttccgagcctggctg
cggtgttatggcacaccgggcatgaactccctgcgggaccggcatggccgcaccatctgg
ttccagggggatcctggacccctggcacccaaagggggcaagtcccgcaagaagaaatcc
aagggagcacagcagggccctgaggacagagtggaggatcctacacttcaaaacaaggcc
actttaaggacacgaaggacacagagaggccttgagcagagtacagcccagcagcccaag
gggaccagcctccaacaggacccagaaacccccctagtccctgagaaagggaagaggagg
aggcgacaggcaacctcaggccgccgcaggccccaaaagatcacaggtgacaccccatcc
ttggagcctgaggggacatcagcctcttaa
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