Sus scrofa (pig): 100512542
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Entry
100512542 CDS
T01009
Symbol
SOX4
Name
(RefSeq) transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100512542 (SOX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100512542 (SOX4)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100512542 (SOX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100512542
NCBI-ProteinID:
XP_013832921
Ensembl:
ENSSSCG00000001081
UniProt:
F1RUF9
A0A8D1M1V6
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All DBs
Position
7:16886834..16895488
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AA seq
477 aa
AA seq
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MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNANSSSSTAASSKPGEKGDKVGGSGGGGHGGGGGSSNAGGGGG
GASGGGGANSKPAQKKSCGSKVAGGAGGGVGKPHAKLILAGGGGGKTAAASSASLAAEQA
GAAALLPLGAAAAADHHSLYKARTPGASASASAAASASTSLGAPGKHLTEKKVKRVYLFG
GLGASSSPVGGVGAGADPSDPLGLYEEGGAGCSPDGPSLSGRSSAASSPTAGRSPADHRS
YASLRAASPAPSSAPSHASSSASSHSSSSSASSSSGSSSSDDEFEDDLLDLNPSSNFESM
SLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaaccaacaacgccgagaacacggaagcgctgctggccggcgagagctcg
gactcgggcgccggcctggagctgggcatcgcctcctcccccacgcccggctccacagcc
tccacgggcggcaaggccgacgacccgagctggtgcaagacgccaagtgggcacatcaag
cggcccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatcatggaacag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgctggaagctgctc
aaagacagcgacaagatccctttcattcgggaggcggagcggctgcgcctcaagcacatg
gctgactaccccgactacaagtaccggcccaggaagaaggtgaagtccggcaacgccaac
tccagctcctccaccgccgcctcctcgaagccgggggagaagggtgacaaggtcggtggc
agcggcgggggcggccacgggggcggcggcgggagcagcaacgcggggggaggaggcggc
ggcgcgagcggcggcggcggcgccaactccaaacccgcgcagaaaaagagctgcggctcc
aaagtggcgggcggcgcgggcggcggggtcggcaagccccacgccaagcttatcctggcg
ggcggcggcggcgggaaaacggcggccgcctcctctgcctccttagcggcggagcaggcg
ggggccgccgccctgctgcccctgggcgccgccgcggccgccgaccaccactcgctgtac
aaggcgcggactcccggcgcctcggcctcggcctcggcggcggcctcggcctcaaccagc
ctcggggccccgggtaaacacctgaccgagaagaaggtaaagcgcgtctacctgttcggc
ggcctgggcgcgtcgtcctcgccggtcggcggcgtgggcgctggcgccgaccccagcgac
cccctgggcctgtacgaggaagggggcgccggctgctcgcccgacgggccgagcctgagc
ggccgcagcagcgccgcctcgtcgcccaccgccggccgctcgcccgccgaccaccgtagc
tacgccagcctgcgcgccgcctcgcccgccccgtccagcgcgccctcgcacgcgtcctcc
tcggcctcgtcccactcctcctcctcctccgcctcctcctcctcgggctcgtcgtcctcc
gacgacgagttcgaagacgacctgctcgacctgaaccccagctcaaactttgagagcatg
tccctgggcagcttcagctcgtcgtcggcgctggaccgggacctggattttaacttcgag
cccggctccggctcgcacttcgagttcccggactactgcacgcccgaggtgagcgaaatg
atctcgggagactggctcgagtccagcatctccaacctggtcttcacctactga
DBGET
integrated database retrieval system