Sus scrofa (pig): 100515330
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Entry
100515330 CDS
T01009
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100515330 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100515330 (SMARCAD1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100515330 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
CUE
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100515330
NCBI-ProteinID:
XP_005667041
Ensembl:
ENSSSCG00000009193
UniProt:
A0A4X1UE56
A0A8D0USB8
LinkDB
All DBs
Position
8:complement(125410221..125488471)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEATPQPSRPGPSSPISLSAEEENAEGEVSRAGTPDSDVT
EKTEDSSVPEMPENERKAGISYFKNQRGIQYIDLSSDSEDIISPNCSSTVQEKKFNKDTV
IIVSEPSEDEESQGLPTVAGRNNNDLSELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEE
SNESAESSSNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDM
QYASPSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTIDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgctttcgctttgagaaaaggaataagattgaggaagcg
cccgaagcaacacctcaaccctcccggcctggcccttcttcaccgatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatgtaact
gaaaaaacagaagattctagtgttcctgaaatgccagaaaatgaaagaaaagcaggtata
tcatatttcaagaatcaaagaggaatacagtatattgatttatcttctgatagtgaagat
attatttctccaaattgttccagtacagttcaagagaaaaaattcaacaaagacacagta
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccgtggcaggt
agaaataataatgatctgtcagaattggaagacctttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaactttttccacaaagaagtgacagtgatttgcttaag
ttgattgaatcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcagaaggtggtgggcctagaaaaagaaaattatcttcttcttcagagccatatgag
gaagatgaatttaatgatgatcaatctataaaaaagaagagactggatcatggagaggaa
tcaaatgagtctgcagaatctagcagtaattgggaaaagcaggaaagtattgtattgaaa
ttgcaaaaggaatttcccaattttgataaagaggaattacgggaagtactcaaggaacat
gaatggatgtacacagaggctttagaatctttaaaagtgtttgcggaagaccaagatatg
cagtatgcttcacccagtgaatttccaaatggaaaagaagtttcttcaagaagtcagaat
taccctaaaaatgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaaatgtctttaatcctaaacgagttattgaagactct
gagtatgattcaggctctgatgtcggtagttccctagatgaggactacagtagtggtgaa
gaagtgatggaggatggctataaaggtaaaattcttcacttccttcaggatgcttccatt
ggtgaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaacgaatggcttatca
gaagatttgatatggcactgtaaaacactgatccaagaaagagatgtcgtcataaggctg
atgaacaaatgcgaagacatttcaaataaattgacaaaacaagttaccatgctcactgga
aatgggggtggatggaacatagagcaaccctctattctaaatcagagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggc
attttggcagatgaaatgggcctaggaaaaactattcaagccattgccttcctggcctac
ctctatcaggagggtaataaaggtcctcatttgatcgttgttccggcatcaactatagat
aactggttaagggaagttaatttatggtgccccactttaaaggtgctctgttactatggt
tctcaagaagaacgtaaacagattagatataatattcatagtaaatacgaagaatacaat
gtaattgtgaccacgtacaattgtgcaatcagcagttccgatgatcgtagtctgtttcgt
cgcttgaaacttaattacgcaatttttgatgagggccatatgctgaagaatatgggctct
atccgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcacaggcaca
cctgtgcagaataatctcttagaactcatgtcactgttgaattttgttatgccacacatg
tttagtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagat
gagcaaagtatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccgttt
attctgagaagagtaaaagaagaggttctcaagcagctacctcccaagaaagatcaaatt
gagttgtgtgcaatgtctgagaagcaggagcagctctatttgggtcttttcaacagattg
aaaaaatctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcaattg
agaaaaatggccaatcaccctttattacatcgtcaatattacacagctgaaaagctcaag
gaaatgtctcagcttatgctgaaggaacccacacactgtgaggctaaccctgacctgatt
tttgaagatatggaggttatgacagactttgaattacatgtactttgcaaacagtatcga
cacattaataacttccagttagacatggacttgattttagattctggaaaattccgagtt
ttaggatgcatattgtcagaattgaaacagaagggtgatagagtcgtattatttagccaa
tttaccatgatgctggatatcttagaggttctcttaaaacatcatcagcataggtacctc
agattagatggaaagactcagatttctgaaagaattcatctaattgacgagtttaatacc
gatatggatatctttgtgtttctgctgtcaacaaaagctggtggcctaggaataaatttg
acctcggcaaatgttgttatacttcatgacattgactgtaatccttacaatgacaaacaa
gcagaggatagatgccatagagtaggccagacaaaagaagtactagttataaaattaata
agccaagggacgattgaagaatccatgctaaaaattaatcaacagaaattgaaactagaa
caagatatgaccacaatagatgaaggtgatgaagggagtatgccagcagatatagccaca
ttactaaaaacgtccatgggcctgtga
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