Sus scrofa (pig): 100525676
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Entry
100525676 CDS
T01009
Symbol
PDZD4
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 4
KO
K24056
PDZ domain-containing protein 4
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100525676 (PDZD4)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
100525676 (PDZD4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
100525676
NCBI-ProteinID:
XP_005674068
Ensembl:
ENSSSCG00000012785
Vega:
OTTSUSG00000004940
LinkDB
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Position
X:complement(124543845..124567477)
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AA seq
790 aa
AA seq
DB search
MGCNMCVVQKPEEQYKVMLQVTGKELSKLSQEQTLEALRSSKEPLVIQVLRRSPRLRGDS
SCHDLQLVDSGTQTDITFEHIMALGKLRPPTPPMVILEPYVLSELPPISHEYYDPAEFME
GGPQEADRVDELEYEEVELYKTSHRDKLGLMVCYRTDDEEDLGIYVGEVNPNSIAAKDGR
IREGDRIIQINGVDVQNREEAVAILSQEENTNISLLVARPESQLAKRWKDSDRDDFLDDF
GSENEGDLRARKLKSPPAQQLGNEEEKAAPDAGPGLSNSQELDSGVGRTDESTRNEESSE
HDLLGDEPLSTANTPGPLRKFGLQGDAVQGRDFHFSMDSLLAEGAGLGGAEVPGLTDEEY
ERYRELLEIKCHLENGNQLGLLFPRASGGNGALDVNRNESVGHEMAVLEEELRHLEFKCR
NILRAQKMQQLRERCMKAWLLEEESLYDLGAGEPKKHELSDISELPEKSDKDSTSAYNTG
ESCRSTPLLAEPLAESPLRRAAAAAAAAAGNSNLNRTPSGPPVATPXKATPPQGSPAKFR
SLSRDPEVARRQHSEERVRRSPKTGVTLERVGPEGSPYLSRRHRGQGQEGEHYHSCMQLA
PPRSLEELGHGPLGLAGGPRVGGRPRRQRRRRAAAAATEAPRMEWKVKVRSDGTRYVAKR
PVRDRLLKARALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLIRAREQRKRREFMM
QSRLECLREQQSGDSKAELNIIALSHRKTMKKRNKKILDNWITIQEMLAHGTRSADGKRV
YNPLLSVTTV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtaatatgtgcgtggtccagaagccggaggagcagtacaaagtgatgcttcag
gtgaccgggaaggagctctccaagctgtctcaggagcaaaccctggaggccctgcgctcc
tccaaggagcccctggtgatccaggtgctgagacgcagtccccgcctccggggggacagc
tcctgccacgacctgcagctggtggacagtggcactcagaccgacatcaccttcgagcat
atcatggcgctgggcaagctgcgcccgcccaccccgcccatggtcatcctggagccgtac
gtcctgtctgagctcccccccatcagccatgagtattatgacccggcggagttcatggag
ggcggcccacaggaggcagaccgtgtggacgagctggagtatgaggaggtggagctctat
aaaaccagccaccgcgacaagctgggcctgatggtttgctaccgcacggatgacgaggag
gacctgggcatctacgtcggagaggtgaatcccaacagcatcgccgccaaagatggccgg
attcgcgagggagaccgaattatccagatcaatggcgtggacgtccagaaccgagaggag
gcggtggccatcctgagccaggaggagaataccaacatctccctgctggtggcccggccg
gagagccagctggcaaaacggtggaaggacagtgaccgggatgacttcctggatgacttc
ggctccgagaatgagggggacctgcgtgcacggaaactgaaatccccccctgcccagcag
cttggaaacgaagaggagaaggcggcccccgatgcggggccgggcctgagcaacagccag
gagctggatagcggggtgggccggaccgacgaaagcacccgcaacgaggagagctctgag
cacgacctgctgggggacgagcccctgagcaccgccaatacgccggggcccctgcgcaag
ttcggcctgcaaggggacgccgtgcagggccgagacttccacttcagcatggactccctg
ctggccgagggggccgggctgggtggcgccgaggtcccgggtctcaccgacgaggagtac
gagcgctaccgggagttgctggaaatcaagtgccacctggagaacggcaaccagctgggt
ctcctcttccctcgggcctctggtggcaacggcgccctggacgtcaaccgcaacgagagc
gtgggccacgagatggccgtgctggaggaggagctgcggcacctcgagttcaagtgccgc
aacatcctgcgggcgcagaagatgcagcagctgcgggagcgctgcatgaaggcctggctg
ctggaggaggagagcctctatgacctgggggccggcgagcccaagaagcacgagctgtcc
gacatctccgagctgcccgagaagtcggacaaggacagcaccagtgcctacaacacgggc
gagagctgccgcagcaccccgctgctggccgagcccctggcggagagccccctgaggcgg
gccgccgctgccgctgccgccgccgccggcaactccaacctgaaccggaccccctccggc
ccccccgtcgccacccccnccaaggccacccctccgcagggcagtcccgccaagttccgg
tccctctcccgggaccccgaggtggcccggagacagcactcagaggagcgtgtccgccgc
agccccaagaccggggtgaccctggagcgcgtgggccccgaaggcagcccttacctgtcg
cgccgccaccgcggccagggccaggagggtgagcactaccacagctgcatgcagctggcc
ccgccgcgcagcctggaagagctgggccacggccctctcggtttggccgggggcccccgg
gtgggggggcggccgcggcggcagcggcggcggcgggcggcggcggcggccaccgaagcg
ccccgcatggagtggaaggtcaaggtgcgcagcgacgggacccgctacgtggccaagcga
ccggtgcgcgaccgcctcctcaaagcccgggccctgaagatccgggaggagcgcagcggc
atgaccaccgacgacgacgcggtgagcgagatgaagatgggccgttactggagcaaagag
gagcggaagcagcacctgatccgggcccgggagcagcggaagcggcgtgagttcatgatg
cagagccggctggagtgcctgcgggagcagcagagcggcgacagcaaggccgagctcaac
atcatcgccttgagccaccgcaaaaccatgaagaagcggaacaagaagatcctggacaac
tggatcaccatccaggagatgctggcccacggcacccgctcggcagacggcaagcgggtc
tacaaccctctgctctccgtcaccactgtctga
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