Sus scrofa (pig): 100621140
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Entry
100621140 CDS
T01009
Symbol
YARS
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic isoform X1
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100621140 (YARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssc01007
]
100621140 (YARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100621140 (YARS)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100621140 (YARS)
Enzymes [BR:
ssc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
100621140 (YARS)
Amino acid related enzymes [BR:
ssc01007
]
Aminoacyl-tRNA synthetase
Class I (A)
100621140 (YARS)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100621140 (YARS)
Prokaryotic type
100621140 (YARS)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100621140 (YARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
100621140
NCBI-ProteinID:
XP_003356343
Ensembl:
ENSSSCG00000029457
UniProt:
I3L804
A0A8D0PIS1
LinkDB
All DBs
Position
6:complement(89088122..89118837)
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AA seq
528 aa
AA seq
DB search
MGDALSPEEKLHLITRNLQEVLGEEKLKEILKERELKVYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEKLKFIKG
TDYQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
AQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKED
VKKKLKKAFCEPGNVDNNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYSDLEKDFA
DEVVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLSSAAYPDPSKQKPVAKGPAKNSEP
EEVIPSRLDIRVGRVISVDKHPDADSLYVEKVDVGEAEPRTVVSGLVQFVPKEDLQDRLV
VVLCNLKPQKMRGIESQGMLLCASVEGVSRKVEPLDPPAGSAPGERVFVKGYEKGQPDEE
LKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNIS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgctctgagccctgaagagaagctgcaccttatcacccggaacctacaggag
gttcttggggaagaaaagctgaaggagatcctaaaggagcgggaacttaaagtttactgg
gggacggcaaccacaggcaagccccatgtggcttacttcgtgcctatgtccaaaatcgcg
gacttcctaaaagcaggatgtgaggtaacaattctatttgcggatcttcacgcatacctg
gataacatgaaagccccatgggaacttctagaactccgaaccagctactatgagaatgtg
atcaaggcgatgctagagagcattggggtgcccttggagaagctcaagttcatcaaaggc
actgattaccagctcagcaaagagtacacgctagatgtgtatcgcctctcctccgtggtc
actcagcacgacgccaagaaggctggagcggaggtggtcaagcaggtggagcaccccctg
ctgagcggcctgctgtacccagggctgcaggccttggatgaagaatatttgaaagtggat
gcccaatttggaggcgttgatcagagaaagattttcacctttgcagagaagtacctacct
gcgcttggctactcaaaacgggtccatctgatgaatcctatggttcccggattaactggc
agcaaaatgagctcttcagaagaggagtccaagattgatctccttgatcggaaagaggat
gtgaagaaaaaactgaagaaggccttctgtgagccagggaacgtggacaacaatggcgtc
ctgtccttcatcaagcatgtcctctttcccctcaagtctgagtttgtgatccttcgagat
gaaaaatggggtggaaacaaaacctacacagcttactcggacctggaaaaggactttgct
gatgaggttgtacaccctggagacctaaagaattctgttgaagtcgccttgaacaagttg
ctggatcccatccgggaaaagtttaatacccctgctctaaagaaactgtccagcgctgcc
tacccagatccctccaagcagaagccagtcgccaaaggccctgccaagaattcggaacca
gaggaggtcatcccgtcccggctggacatccgcgtggggagagtcattagtgtggacaag
cacccggatgcagacagcctgtatgtggagaaggttgacgtgggggaagctgagcctcgg
actgtggtgagcggcctggtgcagtttgtgcccaaggaggacctgcaggacaggctggtg
gtggtgctgtgcaatctgaaaccccagaagatgagaggaatcgagtcccaaggcatgctt
ctgtgtgcttctgtggaaggggtaagccgcaaggttgagcctctggaccctcctgcaggc
tcagctcctggggagcgagtgtttgtgaagggctatgagaagggccaaccagatgaggag
cttaagcccaagaagaaagtctttgagaagctgcaggctgactttaaaatttctgaggag
tgcatcgcacagtggaagcaaactaacttcatgaccaagctggggtccatctcctgtaaa
tcgctgaaaggagggaacatcagctag
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