Sus scrofa (pig): 102166485
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Entry
102166485 CDS
T01009
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102166485 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssc03032
]
102166485 (POLA1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102166485 (POLA1)
DNA replication proteins [BR:
ssc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
102166485 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-DNA_Pol
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
102166485
NCBI-ProteinID:
XP_020936230
Ensembl:
ENSSSCG00000022240
Vega:
OTTSUSG00000004443
LinkDB
All DBs
Position
X:20756674..21064265
Genome browser
AA seq
1468 aa
AA seq
DB search
MAPVHGDDCDLGASAMSDSGSLAASRSRREKKSKKGRQEALERLKRAKAGEKYKYEVEDF
TSVYEEVDEDQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDSQEKGKDDK
ARNKDKRNVKKTVVTKPNNIKSMFIASAGRKTADKAIDLSKDDLLGDILQDLNTETPQIT
PPPVIISKKKRSSGASLNPFSVHTPKAVPSGKTISPVSRKEPSLTPVPLKCAGFAGAPGP
ALRTDDKEESGPMDFEDGDFDEPMEAEEVHVEPVAAKTWDQEREPAEEEKQEADPGKGTT
SNLGSYLPDVSCWDIDQEDDSSFSAPEVQVDSSHLPLVKGADGEQVFQFYWLDAYEDQYS
QPGVVFLFGKVWIELAETHVSCCVMVKNIERTLYFLPRETKIDLNTGKEKGTPVTMKDVY
DEFDEKIAAKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQDLKGETFS
HVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFEAMALKPDLVNVIKDVGP
PPLVVMSLSMKTMQNAKTHENEIIAVAALVHHSFALDKAPPQPPFQSHFCVVSKPKDCIF
PYDFKENIKEKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVC
KVPYWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQH
ILKTERVVIPMENVRNMYSESSHLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGN
IMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDIDGDASKYKKGR
KKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAEKVTEDGE
QEQIPELPDPGLEMGILPREIRKLVERRRQVKQLMKQPDLNPDLVLQYDIRQKALKLTAN
SMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSNS
LEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTSDGNYITKQEV
KGLDIIRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFE
INKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYIICQDGSNLTASQRAYA
PEQLQKHDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHYHKD
EENDALLGGPAQLTDEEKYRDCERFKCPCPTCGTENIYDSVFDGSGTDMEPSLYRCSNIS
CKASPLTFMVQLSNKLIMDIRRCIKKYYEGWLICEEPTCRNRTRHLPLQFSRNGPLCQVC
MKATLRPEYSDKSLYTQLCFYRYIFDVDSALEKLITDHEKDKLKKHFLTPKVLQDYRKLK
STAEQFLSQSGYSEVNLSKLFIDCAVRS
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtgcacggcgatgactgcgacctgggggcgagcgctatgtcagattcaggg
agtcttgcagcttcgcgatcccggcgagagaagaaatccaagaaagggcgacaggaagct
ctagaaagactgaaaagggctaaagctggtgagaagtataaatatgaagtagaggacttc
acaagcgtttatgaagaagttgatgaggaccagtattcgaagctggttcaggcccgccag
gatgatgactggattgtggatgacgatggtattggctatgtggaggatggccgagagatt
tttgatgatgaccttgaagatgatgcccttgattcccaagagaaaggaaaagatgacaaa
gcacgaaacaaagacaagaggaacgttaagaagactgtggtgacaaaaccaaataatatc
aagtcaatgttcattgccagtgctgggaggaaaactgcagataaagctattgacttgtcc
aaggatgatctgctaggtgacattctacaggatctgaacactgagacacctcaaataact
ccgccacctgtaataatatcgaagaagaaaagatccagtggagcttcactgaatcctttc
tctgtgcacacccctaaggcagttccttcaggaaaaaccatttctccagtctcaaggaag
gagccttcgttaactcctgttccccttaaatgtgctggatttgctggcgcgccagggccg
gccttgcggacagatgacaaggaggagtcagggccaatggactttgaagatggcgacttc
gatgagcccatggaagccgaggaggtgcatgtggagcccgtggctgccaagacttgggac
caagagagggagccagcagaggaggagaaacaagaggcagatcctgggaaagggaccacg
tccaatttaggaagttatctcccggatgtctcttgttgggacattgaccaggaagatgac
agcagtttctcagccccggaagttcaagtggattccagtcacctcccactggtgaaaggg
gcagacggggaacaagtatttcagttttattggctggatgcttatgaagatcagtacagc
caaccaggtgtggtatttctgtttggcaaagtttggattgaacttgccgaaacccatgtg
agctgttgtgtcatggtgaaaaacattgagcgaacgctgtacttccttccccgtgaaacg
aaaattgatctaaacacggggaaagaaaaaggaactccagttacaatgaaggatgtttat
gatgaatttgatgagaaaatagcagcaaagtataaaattatgaaattcaagtccaagcca
gtggaaaagaactatgcttttgagatacccgatgttccagaaaaatctgagtatttggaa
gttagatactcggctgaaatgccacagcttcctcaggatttgaaaggagaaactttttct
catgtatttgggaccaatacatccagcttagaactgttcttgatgaacaggaagatcaaa
ggaccttgctggcttgaagtaaaaaatccacagctcctgaatcagccaatcagttggtgt
aaatttgaggcaatggccttgaaaccggacttggtaaatgtaattaaggatgttggacct
cctccactcgtggtcatgtctttaagcatgaagacaatgcagaatgcaaagacacatgaa
aacgagattattgctgtggcagcactggtccatcatagctttgcattagataaagcaccc
ccgcagcctccctttcagtcacacttctgtgttgtgtctaaaccaaaggattgtattttt
ccatatgatttcaaagaaaacattaaggaaaagaatgtaaaggtggaggttgctgcaaca
gaaagaacactgctaggttttttccttgcaaaagttcacaaaattgatcctgatatcatt
gtgggtcataatatttatgggtttgaactggaagtgctgctgcagagaattaatgtgtgt
aaagttccttactggtccaagataggtcggctgaagcgatccaacatgccaaaactcggg
ggcaggagtggatttggtgaaagaaatgctacctgtggccgaatgatctgtgatgtggaa
atttcggcaaaggaattgattcgttgtaaaagctaccatttgtctgaacttgttcaacac
attctgaaaactgaaagggttgtaatcccaatggaaaatgtacgaaatatgtacagtgaa
tcttctcatctcttgtacctgttggaacatacctggaaagatgccaagttcattttgcaa
atcatgtgtgagctaaatgttcttccattagcattgcagatcactaacatcgctgggaac
attatgtctaggacactgatgggtggacgatctgagcgtaatgaattcttgttgcttcat
gcattttatgaaaacaactatattgtgcctgacaagcagattttcagaaaacctcagcaa
aaactgggagatgaagatgaagacatcgatggagatgccagtaaatacaaaaaagggcgt
aagaaagcagcttattctggaggcttggtattggaccccaaagttggtttttatgataag
ttcattttgcttctggacttcaacagtttatatccttccatcattcaggaattcaacatt
tgttttacaacagtgcaaagagttgcttcagaggcggagaaagttacagaggatggagaa
caagaacagatccctgagctgccagatccaggcttagaaatgggcattttgccccgagag
atccggaaactggtagagcggaggagacaagtgaaacagctcatgaaacagccagattta
aatccagaccttgttcttcagtatgacattcgacagaaggctttgaagctcacggcaaac
agtatgtatggctgcctgggattttcctacagcagattttacgccaaaccactggctgct
ttggtgacatacaaaggaagagagattttgatgcatacaaaagagatggtgcagaagatg
aatcttgaagttatttatggagatacagattcaattatgataaacaccaatagcaacagt
ctggaagaagtgtttaaattgggaaacaaggtaaaaagtgaagtgaataagttgtacaag
ctgcttgaaatagacattgatggtattttcaagtctctgcttctgctgaagaaaaagaag
tatgctgctctggttgttgagccaacatcggatgggaattacatcaccaaacaggaggtg
aaaggattagatataattagaagagattggtgtgatcttgctaaagacactggaaacttt
gtcattggtcagattctttcagaccaaagccgggacactatagtggaaaacattcagaag
aggttaatagaaattggagaaaatgtgctaaatggcagtgtcccagtgagccagtttgaa
attaacaaggcattgaccaaggatccccaggattaccctgataaaaaaagcctacctcat
gtgcatgttgccctctggataaattctcaaggaggcaggaaggtgaaagctggagatact
gtgtcatatatcatctgtcaggatgggtcaaacctcactgccagtcagagggcctatgca
cctgagcagctgcagaagcacgacaatttaaccatcgacacccagtactacctggcccag
cagatccacccagtcgtcgctcggatctgtgagccaatagatggaattgatgctgttctc
attgccacgtggttaggacttgaccccacccagtttagagttcatcattatcataaagat
gaagagaatgatgctctgcttggtggcccagcacagctcacggatgaagagaaatacagg
gactgtgaaaggttcaaatgtccatgccctacgtgtgggactgagaatatttatgatagt
gtcttcgatggttcgggaaccgatatggagcccagcttatatcgttgcagtaacatcagt
tgtaaggcttcacctctgacctttatggtacagctgagcaacaaattgatcatggacatc
agacgttgcattaaaaagtactacgaaggctggctgatttgtgaggagcccacatgtcga
aatcgaactcggcaccttccccttcagttttcccgaaatggacctctttgccaagtctgc
atgaaagctacactccggccagagtattctgacaagtccctgtacacccagctgtgcttt
taccggtacatttttgatgtggactctgcactggagaaacttattaccgatcatgagaaa
gataaattgaagaagcactttcttactcccaaagttctgcaggactatagaaaactcaag
agcacagcagagcagttcttgtcccaaagtggctactcggaagtgaacctcagcaaactc
ttcattgactgcgccgtgcggtcctga
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integrated database retrieval system
