Sus scrofa (pig): 110260748
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Entry
110260748 CDS
T01009
Symbol
CLEC4E
Name
(RefSeq) C-type lectin domain family 4 member E
KO
K10059
C-type lectin domain family 4 member E
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04625
C-type lectin receptor signaling pathway
ssc05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
110260748 (CLEC4E)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
110260748 (CLEC4E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssc04054
]
110260748 (CLEC4E)
04091 Lectins [BR:
ssc04091
]
110260748 (CLEC4E)
Pattern recognition receptors [BR:
ssc04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
110260748 (CLEC4E)
Lectins [BR:
ssc04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
Macrophage receptos
110260748 (CLEC4E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
BsuPI
Motif
Other DBs
NCBI-GeneID:
110260748
NCBI-ProteinID:
XP_020948060
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All DBs
Position
5:complement(63219229..63228566)
Genome browser
AA seq
212 aa
AA seq
DB search
MDSSKSAASECTERECFSSQVFLRTITGVSILLLSTCFITRCVVTYHIFQRCDEKKFQAP
DDLMEFSCDNDGSNSVKNCCPLNWIHFQSSCYFFSTNVMSWTASLKNCSSIGAHLVVINT
QEEQEFLFHAKPKRKEFYIGLTDQVIEGQWKWVDGTPFTKSLSFWDIGEPNNIVSVEDCA
TIRDSSNPRQSWNDVPCFFNMFRICEMPERNI
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggactcatccaaatcagctgcatcagaatgcacagagagagaatgcttctcttcccaa
gtgttcttaaggaccattactggggtgtccatcttactactcagtacctgttttatcacc
agatgtgttgtgacatatcacatctttcaacgctgtgatgagaaaaagttccaggcacct
gatgatcttatggagttctcctgcgataatgatggatcaaattcagtcaagaattgctgt
ccattgaactggatacattttcaatctagctgctacttcttctctactaacgtcatgtcc
tggactgcaagtttaaaaaactgctcaagcatcggagctcatctggtggttatcaacacg
caggaggagcaggaattccttttccatgcaaaacctaagaggaaagagttttatatcgga
ctgacggaccaggtgattgagggtcagtggaaatgggtagatggtacccctttcacaaag
tctctgagcttctgggatataggggagcccaacaacatagttagtgtggaggactgtgcc
actataagagactcttcaaacccaaggcaaagttggaatgatgtgccctgtttcttcaat
atgtttcggatttgtgaaatgccagaaagaaatatttga
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