Shewanella sediminis: Ssed_0004
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Entry
Ssed_0004 CDS
T00596
Name
(GenBank) ribonuclease P protein component
KO
K03536
ribonuclease P protein component [EC:
3.1.26.5
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_0004
Enzymes [BR:
sse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
Ssed_0004
Transfer RNA biogenesis [BR:
sse03016
]
Prokaryotic type
5'processing factors
Ribonucrease P
Ssed_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_P
Complex1_LYR
Rsm22
Motif
Other DBs
NCBI-ProteinID:
ABV34617
UniProt:
A8FP44
LinkDB
All DBs
Position
complement(3859..4221)
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AA seq
120 aa
AA seq
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MQVTSYTFTRELRLLTPAQFKSVFTKPIKASSAEITLLAIPNSEQHPRLGLTVAKRFVKK
AHQRNRIKRIIRDNFRLHQHELPPIDIVVLVRNGVVEMENTDLHKLVEKLWRKLNRRYNG
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgactagctatacctttacgcgggagttacgtttgttaactcccgcgcaattc
aaatctgtattcacaaaacccatcaaagcttcttcggctgaaataaccttacttgctatt
cctaactctgaacaacatcctcgtttgggattgactgttgctaagcgttttgtaaagaaa
gcccatcagcgaaacagaattaaacgtatcatcagagataactttcgtttgcatcagcac
gaactgcctcctatcgatatagtcgtactcgtcagaaatggcgtggtagagatggaaaat
acagatctccataaattggtagaaaagctatggcgaaaactcaatcgccgttacaatggc
tag
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