Shewanella sediminis: Ssed_0343
Help
Entry
Ssed_0343 CDS
T00596
Name
(GenBank) phenylalanine/histidine ammonia-lyase
KO
K01745
histidine ammonia-lyase [EC:
4.3.1.3
]
Organism
sse
Shewanella sediminis
Pathway
sse00340
Histidine metabolism
sse01100
Metabolic pathways
Module
sse_M00045
Histidine degradation, histidine => N-formiminoglutamate => glutamate
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
Ssed_0343
Enzymes [BR:
sse01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.3 histidine ammonia-lyase
Ssed_0343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
SLBP_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
ABV34956
UniProt:
A8FQ33
LinkDB
All DBs
Position
complement(396941..398584)
Genome browser
AA seq
547 aa
AA seq
DB search
MMNSKQVVMASLALSLMSGSALAMDSVVLDGQHMTQAQAWAIADGAKVKIGDKAAKNLVK
AHELLMDAARLGKPVYGLTVGVGLNKDQKLFTADGKLSKAVMEASKSFNYSTLRAHSAAM
GEAVPVRLTRVALAVRLNTILSGQTGVQPYVAELYQQYLNKGITPVIPSKGTVGEADILM
ASHVGLAMIGEWDVFYKGKRVSSVKAMKDAGVKPLKPIGKDALSILSNNSVAVAYAMKGY
RDASHLMTVSPTVFSLSLEGLNGNVSPFLPQTNDIRPFPYIKEATSEILNQLDGSYLWQL
NDQRSLQDPLSYRTTAYTFAGAKKALADLGEVIDVQINHSDDNPGVILNASKDYTQHPQV
AKYLIEGKGGVFPTTNFEPLPVALAVQGLSVALTHVSHNSVMRTVHLSDSHFTKLSRFLG
APGNNGHAFGAIQKNFVDMQVRNKHLASPVSFDGIPVAGNIEDTFTNLKLASDNLIQIVD
NTNYIYGLELLHSTQAIDLRKLTNPNLDMGKATKAMYKNYRKQVPFVELDRPFTPDIKAS
YDFIAQY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatagtaagcaagttgttatggcctctctggcgttaagcctgatgtcaggaagt
gcactggcaatggatagtgtggttttagatggccagcatatgacacaagcacaagcgtgg
gcaattgccgacggcgctaaggtcaagattggcgataaggcagctaaaaacctggttaag
gctcatgagctattgatggatgcggcacgtttaggtaagccggtctatggtttaactgtc
ggtgtcggactgaacaaagatcagaagctatttaccgccgatggcaagctaagcaaggcc
gtaatggaggcctctaagagcttcaactacagcacactacgtgctcacagcgctgcgatg
ggagaagccgtaccggttcgcctgacccgtgtcgcactggctgtacgcctaaacaccatt
ctatcaggtcaaactggtgttcaaccatacgttgccgagctataccagcagtacctgaac
aaggggatcaccccggttatcccatctaagggcactgtaggtgaggccgatattttgatg
gcatcccatgtgggtctggccatgatcggtgagtgggacgtgttctataaaggtaagcgt
gtcagcagtgttaaggcgatgaaggatgccggcgttaagccacttaagcctatcggtaaa
gatgcgctctctatcctctctaacaactctgtcgcggttgcctatgccatgaagggttac
cgggatgcatcacacctgatgacggtttcgccaacggtattcagccttagcctggaaggt
ctgaacggcaacgtatctccattcctgcctcagactaacgatattcgtcctttcccttac
atcaaggaagcaacaagcgaaattcttaaccagctagatggcagctacctgtggcagctg
aacgatcaacgttcactacaagatccacttagctaccgtacaaccgcttatacttttgcg
ggtgctaagaaggcactggccgatctgggcgaagttatcgatgtacagattaaccactca
gatgataacccaggcgtgattcttaatgcatcgaaggattacactcagcatcctcaggtc
gctaagtatcttatcgaaggtaaaggcggggtattcccgaccactaacttcgagccgcta
ccagttgccttggctgttcagggactcagcgtggcattgacccatgtgtctcacaacagt
gtgatgcgcaccgttcatctatcagatagccatttcactaagctatctcgcttcctgggt
gcacctggtaacaatggtcacgctttcggcgctatccagaagaacttcgtcgatatgcag
gtgcgtaacaagcatttggccagcccggtttcattcgacggcatcccggttgcgggtaat
atcgaagatacattcactaacctgaaactggcttcggataaccttatccagatagtcgat
aacaccaactacatctatggtctcgaactgctgcattcaactcaggccatcgatctgcgt
aagctgaccaatccaaacctggatatgggtaaagcgaccaaggctatgtacaaaaactat
cgcaagcaggtgccattcgttgagttagaccgtccatttacgccggatatcaaggcgtct
tacgactttatcgctcaatactaa
DBGET
integrated database retrieval system
