Shewanella sediminis: Ssed_2780
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Entry
Ssed_2780 CDS
T00596
Name
(GenBank) pyridoxal-dependent decarboxylase
KO
K24264
aspartate 1-decarboxylase [EC:
4.1.1.11
]
Organism
sse
Shewanella sediminis
Pathway
sse00770
Pantothenate and CoA biosynthesis
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
Ssed_2780
Enzymes [BR:
sse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.11 aspartate 1-decarboxylase
Ssed_2780
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Gene cluster
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Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
P53_tetramer
Motif
Other DBs
NCBI-ProteinID:
ABV37387
UniProt:
A8FX14
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Position
3352760..3354412
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AA seq
550 aa
AA seq
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MTARQAKASEEALLRIFTIPEAPGSTLSVIEQNISQNLMGFLQESVVAVEKPLTEIERDF
QEHQIPAAPKFVSDYADEMMKTLVAHSVHTSAPSFIGHMTSALPYFVLPLSKMMVGLNQN
LVKIETSKAFTPLERQVLGMMHHLIYDENETFYNSWMHSANVSLGAFCSGGTVANITALW
TARNQLLKADGDFKGIAAQGLMKGLRHYGYNDLAILVSERGHYSLGKTADLLGIGRENII
QIPTSNDNRVDVDKMRVTAKALERDNIKVMAIVGVAGTTETGNIDPLDKLATLAEELDCH
FHVDAAWGGASLLSKKYRHLLKGIERADSVTIDAHKQMYVPMGAGMVIFKDPTFANAIKH
HAEYILRKGSKDLGSQTLEGSRPGMAMLVHACLQIIGRDGYEILINNSLEKARYFAELIK
TTDNFELVSEPELCLLTYRYVPESVQKAMQQARTDGDIERLLQFNRLLDGLTKFVQKRQR
EQGTSFVSRTRINPEHCHDIDVDLKSVVFRVVLANPLTTNEILQQVLVEQTQIASTDKKF
LPQLLELAAH
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaagacaagcaaaagcttccgaagaggcgttactacgtattttcactatcccc
gaagccccaggttcaaccctgagcgtcattgaacaaaatatctcgcaaaacttaatggga
ttcttgcaagagagcgtggttgcggtcgaaaagccgttaaccgaaatagaacgcgacttt
caggaacatcaaatccccgctgcccctaagtttgtctcagattatgccgatgagatgatg
aaaaccttagtggcgcactcggtgcacacctcggcccccagcttcatcggccatatgacc
tcggcgctgccctattttgtattgcctctgtccaagatgatggtgggactcaatcaaaac
ctggttaaaattgaaacctcgaaggcctttacgccactcgaacgtcaggttttgggcatg
atgcatcacctcatctacgatgagaatgaaacgttttacaatagctggatgcacagcgca
aacgtctccctcggcgcattttgctccggcggaaccgtagctaacatcacggccttgtgg
actgcccgtaaccagctattaaaagccgatggcgactttaaaggcatcgcggctcagggg
ctgatgaaggggttacgccattatggttacaacgatttagccattctcgtctccgagcgt
ggccactactctttgggtaaaaccgccgatctactcggtattggccgggaaaacatcatt
caaatacccacatccaatgacaaccgggtggatgtggataagatgcgtgtcacggctaag
gcgcttgagcgtgacaatattaaggtcatggcgatagtgggcgtagccggcaccacagag
acaggtaatatcgaccccttagataagctggccacattggcagaagagctggactgtcac
ttccatgtcgatgcggcttggggcggtgcatccttgctatccaagaaataccgtcacctg
cttaaagggatagagcgcgccgactcggtgaccatagatgcccacaaacagatgtatgtg
cccatgggcgccggcatggtgatcttcaaagaccccaccttcgccaatgctatcaagcat
cacgccgagtacattctgcgtaaaggctcaaaagatctcggtagtcagactctggaggga
tctcgtccgggtatggcgatgttagtccacgcctgtttgcagataatcgggagagacggc
tatgagatcctgatcaataacagcctggaaaaagcccgttattttgccgaactcatcaag
acgacagataattttgaactggtgtcagaacctgagttgtgtctgctgacctatcgatat
gttcctgagtcggtgcaaaaggctatgcaacaagcaagaaccgatggcgatattgagcga
ttattgcagtttaatcgcctgctcgatggattaactaagtttgtgcagaaacgtcaacgt
gagcaaggcacctccttcgtctcccgtacccgtattaatcctgaacactgccatgacata
gatgtcgatctgaaatccgtggtatttcgcgtcgtgctggcaaatccattgacgaccaat
gaaattctacaacaggtactcgtcgaacagacgcagatcgcctcgacagataaaaaattc
ttgccccagttgctggaactggccgctcattga
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