Shewanella sediminis: Ssed_4420
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Entry
Ssed_4420 CDS
T00596
Name
(GenBank) 4Fe-4S ferredoxin, iron-sulfur binding domain protein
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
sse
Shewanella sediminis
Pathway
sse00630
Glyoxylate and dicarboxylate metabolism
sse00680
Methane metabolism
sse01100
Metabolic pathways
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ssed_4420
09102 Energy metabolism
00680 Methane metabolism
Ssed_4420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_7
Fer4_11
Fer4_9
Fer4_10
Fer4
Fer4_6
Fer4_2
Fer4_21
Fer4_8
Fer4_3
Fer4_4
Fer4_16
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
ABV39022
UniProt:
A8G1P9
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Position
complement(5402649..5403239)
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AA seq
196 aa
AA seq
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MAVMKFLCDTKRCIECNGCVTACKNENDSALEWGIQRRRVVTINDGEPGEASLSVACMHC
TDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGAPQFPKKGAFGSRGKMDK
CTFCAGGPEETHSDAERQKYGSNRLAEGKLPMCAELCATKSLLAGDADIVSSIYRERIVA
RGNPNAIWGYTPKTGA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcatgaaatttctgtgtgacaccaaacgctgcatcgagtgtaacggttgtgtc
actgcttgtaagaacgaaaacgattccgctctcgagtggggtattcaacgtcgccgcgta
gtaacaattaacgatggtgagccaggtgaagcatctctctcagtggcttgtatgcactgt
accgatgcaccttgtcaggcagtttgcccagcaaactgtttctacaagactgaagacggt
ttaacgctacacaacaaagatacctgtatcggttgtggttactgtctatacgcctgccca
ttcggcgcgcctcagttccctaagaagggtgcttttggtagccgtggcaagatggataag
tgtactttctgtgccggtggcccggaagagactcattcagatgctgaacgtcagaagtac
ggttcaaaccgtctggctgaaggtaagttgcctatgtgtgctgaactttgtgcaactaag
tcgctgttagcgggtgatgcagatatcgtttcaagcatctatcgtgagcgtattgttgca
cgtggtaatccaaatgcgatatggggctatacccctaagactggcgcgtag
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