Shewanella sedimentimangrovi: JYB85_09580
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Entry
JYB85_09580 CDS
T07846
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_09580
Transporters [BR:
ssem02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB85_09580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Motif
Other DBs
NCBI-ProteinID:
QSX35644
LinkDB
All DBs
Position
2203856..2206597
Genome browser
AA seq
913 aa
AA seq
DB search
MFQYKPSLLTLALVAAGASMYSYGALAAEDAANQKAEDESIEVIQVTGIRRSLQESQATK
MSNSSVVEAISAEDIGKLPDVSIAESLARLPGVAAQRLDGRANVISIRGLGPDFTTATLN
GREQASVNDNRGVEFDQYPSELLNQVVVYKTPDATLMAQSIGGTVDMRTISPLAHGEQTI
AVSARGELNDLGALNSDSTDKGYRASISYVDQFLDDTLGFAFGYARMQSPNQEERWQAWG
YPNLDYDDTKPNVLGGAKPFVRSSELERDGFLMVLEYQPNDQFHSLLDVYYSQFKDQQLL
RGIEIPGQWGGGWANSGITAISEDNGLVTQGVINNAGVVVRNDINTRDADALSMGWNNKY
IVNDNWSLEADIALSKANRTDIGMESYSGTGRGNGNGATDTLGFTYQGDGRYQFTHDLNY
ADPNLIKLGGAFSWGNPVGPDSQDGFINKPEIEDELKSMRLAAEYVLDSGAVRSVQFGVN
YTEREKSKLDQGFYLTLKDYPEMLTIPAKYLLDPTSLAFFGMGDMLSYDSLAFYNDGNYI
ETNADKVDLGRATNSWLVNEEVTTGFVKANLETEVFGLPLSGNVGLQAVHTDQSSNGTAA
TVNPETKKVEKTPVTAGDSYLEWLPSMNLAFEVAEDQVVRLAAARTLTRARMDKMNANVA
YSYIEIPSAGNPNWTGGGGNPQLRPWLARQYDISYENYFADQGYFAIAMFYKDLENYVYD
QRSDFNFGELFPEKTGNPIGKVTQPQNGNGGYVRGIEATVQLDFGYFVPEMEGFGMYLSG
TYNESEVKETADSEPTTLPGLSEKTFNATVYYENSGFQARISSRYRSDFLGEVTEISLKR
THVNVKAETVVDAQVGYDFSESGIEALYGLSVLFQVNNLTNEPFISYTGDDQRFVRDYQN
YGRNYMLGVNYKF
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgttccaatataaaccgagcctactgacgttggcactggtagccgccggtgccagcatg
tattcctacggcgcgctcgccgcagaagatgctgccaaccaaaaagctgaagacgaatcc
attgaagttattcaggtgaccggtatccgccgttcactgcaagaatcccaagccaccaag
atgtccaactcttcggtggttgaggccatttcggccgaagatattggcaagttgcccgac
gtcagtattgctgaatctctggcacgtttgcccggtgttgctgcgcaacgtcttgacggt
cgcgccaacgtaatctctatccgtggtctgggcccagactttacaacagccactctcaat
ggccgtgaacaggcctcggtcaacgataaccgtggtgttgagtttgaccagtacccatct
gaacttcttaaccaggttgtggtgtacaaaacgcccgatgcaaccctgatggcccaatcc
atcggcggcaccgtcgacatgcgcaccatcagcccccttgcccacggtgaacaaaccatt
gccgtttcagcccgcggcgaactgaacgatctgggcgcgcttaacagcgacagcactgat
aaaggttatcgcgccagtatctcctatgtggatcaattcctcgatgacaccctgggattt
gctttcggttatgcccgcatgcagtctcccaaccaggaagagcgttggcaggcgtggggt
tatccaaacctggattatgatgacaccaaaccaaatgtactgggtggagccaagcctttc
gtccgttccagcgagctggaacgtgacggtttcctgatggtgctggaataccagccaaac
gatcaattccacagcttactggatgtgtattactcccagttcaaggaccaacaactgctg
cgaggcatcgaaatacctggccagtggggcggaggttgggcaaatagcggtatcactgcc
attagcgaagacaacggtctggtgacccagggcgttatcaacaatgcgggcgttgtagtg
cgtaacgacatcaatacccgcgacgccgacgccctgtccatgggctggaataacaagtac
atagtcaatgacaactggagtctggaggcggatatcgccctgtccaaggccaaccgtacc
gacataggtatggaaagctacagcggcaccggccgtggcaatggcaatggtgccaccgac
accctgggcttcacctatcaaggcgatggccgttatcaatttacccatgatctgaattat
gccgaccccaatttgatcaagcttggcggtgccttcagctggggtaacccggttggcccg
gacagccaggacggttttatcaacaaacccgaaattgaggatgaactcaagtccatgcgt
ctggccgccgagtatgtgctcgacagcggtgccgtgcgcagcgtgcaattcggtgtcaac
tacaccgagcgcgaaaagtccaagctggaccagggtttctatctgaccctgaaagattat
cctgaaatgctgacgattccggcgaagtacctgcttgatccaacctctctggcgtttttc
ggcatgggtgacatgctgagctatgactccctggctttctacaacgatggcaactacatc
gaaaccaacgccgataaggttgatctcggccgtgccaccaactcctggttggttaatgag
gaagtcaccaccggttttgtcaaagccaacctggaaaccgaagtctttggtttgccgctg
tccggtaacgtcggcctgcaggcagtacacacagaccaaagctccaacggcacagcggcg
actgttaatcctgaaaccaaaaaagtagagaaaactccagttaccgccggtgacagctat
ctggaatggctgcccagcatgaacctggcattcgaagtggcagaagatcaggtggtacgc
ctggcagcggcccgcaccttgacccgtgcccgcatggacaagatgaatgccaacgtcgcc
tacagctacattgagatcccatcagcggggaatccgaactggaccggtggtggcggcaat
ccacagctgcgcccctggttggcccgtcagtatgatatcagctacgaaaattactttgcc
gatcagggctatttcgcaatagccatgttctacaaggatctggaaaactacgtctacgat
cagcgtagcgattttaacttcggtgagctgttcccagaaaaaacaggtaatcccatcggt
aaggtgactcaaccacagaatggtaacggtggttacgttcgcggtatcgaagccactgtg
cagttggatttcggttatttcgtacccgagatggaaggtttcggtatgtacctgagcggt
acttacaatgaaagcgaagtcaaggaaacagccgacagtgaacccactacactgccaggc
ctgtctgagaagaccttcaatgccacggtttactacgaaaacagtggtttccaggcacgt
atcagctcacgttaccgctcagacttcctgggtgaagtaacggaaatcagcctgaaacgt
acccatgtgaacgttaaggccgaaaccgtggttgatgcccaggtgggttatgacttctct
gaaagtggcatcgaagccctgtacggcttgtcggttctgttccaggtgaacaacctgacc
aacgagcctttcatctcctacacaggtgatgatcagcgtttcgttcgcgactaccagaac
tatggtcgtaactacatgctgggtgtgaactacaagttctaa
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