Shewanella sedimentimangrovi: JYB85_15830
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Entry
JYB85_15830 CDS
T07846
Name
(GenBank) 2-oxoacid:acceptor oxidoreductase subunit alpha
KO
K00174
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:
1.2.7.3
1.2.7.11
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00010
Glycolysis / Gluconeogenesis
ssem00020
Citrate cycle (TCA cycle)
ssem00620
Pyruvate metabolism
ssem00650
Butanoate metabolism
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
ssem01210
2-Oxocarboxylic acid metabolism
Module
ssem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JYB85_15830
00020 Citrate cycle (TCA cycle)
JYB85_15830
00620 Pyruvate metabolism
JYB85_15830
00650 Butanoate metabolism
JYB85_15830
Enzymes [BR:
ssem01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
JYB85_15830
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
JYB85_15830
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
Hs1pro-1_N
Motif
Other DBs
NCBI-ProteinID:
QSX36726
LinkDB
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Position
complement(3542750..3544576)
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AA seq
608 aa
AA seq
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MNQKINDFVVRFANTNGTGSASANNMFAKAIFRMGIPVSAKNIFPSNIQGMPTWYEVRVS
DKGYLGRRGGRADLLVAMNAQSLTADIQSVESGGYLLYDSSKPLDEAVLRDDIHMLGMPI
SMICVKEYSDPRQRQLFKNVIYIGALAALLEIEFQVLKDLISDQFKGKEKLITPNIHALE
IGFQFATSHFDCPLPFRVERREYNRGKIMMDGNTATALGALYGGATVVGWYPITPSTSVV
EKFAAYCQRLRIDPASGNNNFAIVQAEDELAAMGMVLGATWNGARAFTATSGPGVSLMTE
FLGLGYFAELPAVLINVQRAGPSTGMPTRTQQADLLACAYASHGDTKHVLLFPADPEECF
SLTAQAFDIADQLQTPVILMSDLEIGMNDHLCCELEWQDDYQYQRGKVLSAAELDELERY
GRYLDVDGDGICYRVLPGEHPQKGAFFTRGTSRDRFAVYTEKGDEYVQNMTRLAEKFRTA
VRYLPRPECREGDKSAAIGLIYYGSTTAAIEEAQDLLRDQGLSSDCLRIRAFPFHSEVQD
FIERHQQVFVIEQNRDGQMRTLLTMELEQDPQQLQSVLHFDGLPISGRFIAAEIVARMAR
DAQTQEAG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaaaatcaatgatttcgttgtgaggttcgccaacaccaacggcacggggtcc
gccagcgccaacaacatgtttgccaaggcgattttccgcatgggcatacccgtcagcgcc
aagaacatcttcccctccaacatccagggcatgcccacctggtacgaggtcagggtcagc
gacaagggctacctcggccgtcgcggtggccgcgccgatctgctggtggccatgaatgcc
cagagtctgacggcggatatccagagcgtcgagagtggcggctacctgctgtacgactcc
tccaaacccctggacgaggccgtgctgcgggacgacatccatatgctggggatgccgatt
tcgatgatctgcgtgaaggagtacagcgatccgcgtcagcgacagctgtttaaaaacgtc
atctacataggcgccctggcggcgctgctggagatagagtttcaggtgctcaaggatctg
atttccgatcagttcaagggcaaggaaaagctcatcacccccaatattcacgccctggag
atcggcttccagttcgccaccagtcattttgactgtccgctgccgtttcgggtggagcgg
cgggaatacaaccgcggcaagataatgatggacggcaacacggccacggccctgggggcc
ctgtacggcggcgccacagtagtgggctggtatcccatcaccccctccacctctgtggtg
gagaagttcgccgcctactgccaaaggctgcggatcgatcccgccagcggcaacaataac
tttgccatagtccaggccgaggacgagctggcggccatgggcatggtgctgggggccacc
tggaacggcgcccgggcctttaccgccaccagcggtcccggggtgtcgctgatgaccgaa
tttttggggctgggctattttgccgagctgccggctgtgcttatcaatgtgcagcgggcc
ggtccctcaaccggcatgccgacccgcacccagcaggcggatctgctggcctgcgcctat
gcctcccacggcgacaccaagcatgtgctgctgtttcccgccgatcccgaggagtgtttc
agccttacggcccaggcgtttgatattgccgatcagctgcagaccccggtgatcctgatg
agcgatctggagatcggcatgaacgatcatctgtgctgcgagctggaatggcaggatgac
taccagtatcagcgtggcaaggtgctgagtgccgccgagctcgacgagctggagcgctac
ggccgttacctcgatgtggacggtgacggcatctgctaccgggtattgccgggggagcat
ccccagaagggcgccttctttacccgaggcacctccagggatcgctttgctgtctacaca
gagaagggcgatgagtatgtacagaacatgacccggctggcggagaaattccgcaccgcg
gtgcgttacctgcccagacccgaatgccgcgagggtgacaagagcgccgccattggcctc
atctattacggcagcaccactgcggccatagaggaggcccaggatctgctgcgggatcag
ggactgagttccgattgcctgcggatccgcgcctttcccttccatagcgaggtgcaagac
tttatcgagcgccatcagcaggtgtttgtgatagagcaaaaccgcgacggccagatgcgc
accctgctgaccatggagctggagcaggatccgcagcagctgcaaagcgtgctccacttc
gatggcttgcccatcagcggccgttttattgccgccgagatagtggccagaatggcccgt
gacgcccaaacccaggaggcaggctga
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