Solea senegalensis (Senegalese sole): 122762895
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Entry
122762895 CDS
T07721
Name
(RefSeq) putative ATP-dependent RNA helicase an3 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122762895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122762895
03041 Spliceosome [BR:
ssen03041
]
122762895
03036 Chromosome and associated proteins [BR:
ssen03036
]
122762895
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122762895
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122762895
mRNA cycle factors
Common to processing body (P body) and stress granule
122762895
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122762895
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122762895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
122762895
NCBI-ProteinID:
XP_043873991
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MSHVVIDNQHGLDQQLAALDLNSADGQGGGTGRRYIPPHLRNKDASKNAGNAYSAGRQCG
YSVAPVNLYAPGWDGGRSNGFVNGYHDNRTNGGFGGRGPPRNDRGGRGAYRGNRGGGSFN
QPLQNAGFGTYENKDSNWGGGQPRDAAYSSFGGRTDRSKSAFFNDRGAGSRGRYERGGFG
GGGGNSRWAEDAREDDWSKPTAPNERLERELFAGSNTGINFEKYDDIPVEATGNKCPPHI
ESFHDVEMGEIIMGNIDLSRYTRPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLPVL
SQIYTEGPGDALQAAKGGGQDNGRYGRRKQYPISLVLAPTRELALQIYDEARKFAYRSHV
RPCVVYGGADIGQQIRELERGCHLLVATPGRLVDMMERGKIGLEYCNYLVLDEADRMLDM
GFEPQIRRIVEQDTMPPKGIRHTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENI
TQKVVWVEEPDKRSFLLDLLNATVIPTEVQDNVTEPPEKPGKDSLTLVFVETKKGADALE
DFLYCEGYACTSIHGDRSQRDREEALHQFRSGRSPILVATAVAARGLDISNVKHVINFDL
PSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILGEAKQEVPSWLESLAYDH
QHKSSGRGRSKRFSGGFGARDYRQTPGGAANFGGSRGGRSTGGHGGNRGFGGGGFGGNFY
GNDGYGGNYSHSGSVDWWGN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcattgataatcaacacggtctagatcagcagcttgctgccctagac
ttgaactctgctgacggacaaggcggaggaactggcaggcgttatattccacctcacctg
aggaacaaagatgcttccaaaaatgcaggaaatgcttattccgctggtagacagtgcggt
tattcagtggcaccagtaaatctctacgctccaggatgggacggcggacgcagcaacgga
tttgtgaacggttaccacgacaaccgcacaaacgggggcttcggagggcgaggaccccct
cgcaacgatagaggtgggcgtggcgcctaccgtggtaacaggggtggaggctcgtttaat
cagccattacagaacgcaggattcggcacctacgaaaacaaagacagcaactggggagga
gggcagccgcgggacgccgcctacagcagctttggaggccggactgatcgctccaagtcc
gccttcttcaacgaccgtggggccggctcaagaggaagatacgagcgcggcggcttcggt
ggcggtggaggaaacagccgctgggcggaggacgccagagaagacgattggtccaaaccc
actgctcccaacgaacgcctggagcgtgaactcttcgctggaagcaacactgggatcaac
tttgagaagtacgatgatattcccgtggaggccactgggaacaaatgcccaccccacatc
gagagtttccatgacgtggaaatgggggagatcatcatggggaacatcgatctgagccgc
tacactcgtcccactccagtccagaagtacgctatccccatcatcaaggccaagagggac
ctgatggcctgtgcccagactggctctggtaagacggctgccttcttgctgcccgtgctg
agtcagatctacactgagggtccaggagacgctctgcaggctgccaaaggcggtggacag
gacaatggaaggtacggccgtcgtaagcagtacccgatctccctggtgttggcccccacc
agagaactggccctgcagatctatgacgaggcgaggaagtttgcctatcgctcacacgtg
cgtccctgtgtggtgtacggcggcgctgacattggtcagcagatcagggaactggagaga
ggctgccacctgctggtagccacacccggccgtctggtggatatgatggagaggggaaag
atcggcctggaatattgcaactacctggtcctggatgaggctgaccgcatgttggacatg
ggttttgagcctcagatcagacgcatcgtggagcaggacacgatgccacccaaaggcatt
cgtcacaccatgatgttcagtgccaccttccccaaggagatccagatcctggctcgtgat
ttcctggaggactacattttcctggctgtgggtcgcgttggttctacctcagaaaacatc
acccagaaggtggtgtgggtggaggagccggacaagaggtccttcctcctggacctgctc
aacgccacagttattcccactgaggttcaggacaatgtgacagagcccccagagaagccg
ggtaaagactcgctgacgctggtgtttgtggaaaccaagaaaggcgctgacgccctggag
gacttcctgtactgcgaaggctacgcctgcaccagcatccacggggacagatcccagaga
gaccgagaggaggcgctgcatcagttccgctccggacgcagccccatcttagtggccaca
gccgtggctgctcgaggtctggacatctccaacgtgaagcacgtcataaactttgacttg
cccagtgacattgaggagtacgttcaccgtattggccgtacgggacgtgtgggcaacctc
ggtctggccacgtcgttctttaacgacaaaaacagcaacataaccaaagatttgctggac
atcctcggggaggcgaagcaggaggttccctcctggttggagagtctcgcctacgaccac
cagcacaagagcagcggccgcggacgctccaagaggttctctggtggtttcggagctcgg
gattaccgtcagacgcccggcggcgctgcaaacttcggtggaagccgcggaggtcgtagc
acgggaggtcacggaggaaaccgcggcttcggtggaggcggcttcggcggaaacttctac
ggcaatgacggctacggaggaaactacagtcactctggtagtgtggattggtggggcaac
tag
DBGET
integrated database retrieval system
