Solea senegalensis (Senegalese sole): 122780761
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Entry
122780761 CDS
T07721
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03320
PPAR signaling pathway
ssen04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
122780761 (rxrgb)
03320 PPAR signaling pathway
122780761 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122780761 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssen03310
]
122780761 (rxrgb)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
122780761 (rxrgb)
Nuclear receptors [BR:
ssen03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
122780761 (rxrgb)
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
122780761
NCBI-ProteinID:
XP_043899929
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Position
LG14:10815743..10843667
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AA seq
465 aa
AA seq
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MWHPVSSPATGGSSAREISYSHYSTGPMSAAHTHPPPMGGMVGHPSVISTSRHLPSPMST
MGSQMNGLASPYPVITSSLGSPSVSLPSTPNMNFGPLGSPQMNSMNSVSSSEDIKPPPGL
QNMGNINYQSTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDS
KECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGRERGENEVESTSSFNEDMPVDK
ILDAELAVEPKTETYSEGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQ
VILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccctgtatcatcacctgcaactggaggaagctctgcgagggagataagttac
agtcactactcaacagggccaatgagcgcggcccacacccacccgcctcccatgggcggc
atggtgggacacccatcggtcatcagcacttccaggcacctgccgtcccccatgtccacc
atgggctcacagatgaacggcctggcctcaccttaccctgttattacatcatctttgggt
tcaccctctgtatcactgccatccacgcccaacatgaactttggaccactcggcagtcca
cagatgaactctatgaacagtgttagcagctcggaggacatcaagcctccaccagggcta
cagaacatgggaaacatcaactaccagagtacaagccccgggggaatgtcaaaacacatc
tgcgccatttgtggggaccgctcctcaggaaagcactatggtgtgtacagctgtgaggga
tgcaagggctttttcaaaaggactgtccggaaagatctcacttacacgtgtcgagacagc
aaggaatgcctcatcgacaaacgccagcggaatcgctgtcagtactgccgctaccagaag
tgcctggccatgggcatgaagagagaagcggtgcaggaagagaggcagcgtggcagggag
cgaggggagaatgaggtggaatctaccagcagtttcaacgaggacatgcctgtggacaag
atcctggatgctgaactcgccgtggagcccaaaacagagacatacagcgaaggcagcccg
ggaaactctaccaacgacccggtcaccaatatctgccaagcagcagacaagcagctcttc
actttggtggagtgggcaaaaaggatcccgcacttctccgaactccccctcgacgatcag
gttattctactacgagcaggctggaacgagctgctcattgcctcattctcgcatcgctca
gtcactgttaaagatggcatcctattggcaacaggcctacatgtccacagaagcagcgcc
cacagtgctggagtaggctccatctttgatagggtcctaacagagttggtatccaaaatg
aaagacatgcagatggacaagacagagctcggttgccttcgagccatcgtcctcttcaac
ccagatgcaaaaggtctttcaaacccaccagaggtcgagggactgagggaaaaagtctat
gcttcacttgagtcgtatacaaaacagaaatacccagaccagcctggcaggtttgctaaa
ctgctgctccgcctgccggccctgcgctccatcggcctcaagtgcctggagcatctgttc
ttcttcaagctgatcggggacacgcccatcgacaccttccttatggagatgctggaggcc
cctcatcagatcacatga
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