KEGG   Staphylococcus schweitzeri: NCTC13712_01209
Entry
NCTC13712_01209   CDS       T06947                                 
Symbol
polC_1
Name
(GenBank) DNA polymerase III polC-type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
ssh  Staphylococcus schweitzeri
Pathway
ssh03030  DNA replication
ssh03430  Mismatch repair
ssh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC13712_01209 (polC_1)
   03430 Mismatch repair
    NCTC13712_01209 (polC_1)
   03440 Homologous recombination
    NCTC13712_01209 (polC_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssh03032]
    NCTC13712_01209 (polC_1)
   03400 DNA repair and recombination proteins [BR:ssh03400]
    NCTC13712_01209 (polC_1)
Enzymes [BR:ssh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC13712_01209 (polC_1)
DNA replication proteins [BR:ssh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCTC13712_01209 (polC_1)
DNA repair and recombination proteins [BR:ssh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCTC13712_01209 (polC_1)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 HHH_3 tRNA_anti-codon RNase_H_2 T2SSK Ribosomal_S19e YhfH
Other DBs
NCBI-ProteinID: VEE65789
UniProt: A0A448CVR7
LinkDB
Position
1:1260179..1264495
AA seq 1438 aa
MAMTEQQKFKVLADQIKISNQIDSEILNSGELTRIDVSNKNRTWEFHITLPQFLAHEDYL
LFIHAIEQEFKDIANVTCRFTVTNGTNQDEHAIKYFGHCIDQTALSPKVKGQLKQKKLIM
SGKVLKVMVSNDIERNHFDKACNGSLIKAFRNCGFDLDKIVFETNDNDQEQNLASLEAHI
QEEDEQSARLATEKLEKMKAEKAKQQDNNESAVDKCQIGKPIQIENIKPIESIIEEEFKV
AIEGVIFDINLKELKSGRHIVEIKVTDYTDSLVLKMFTRKNKDDLEHFKALSVGKWVRAQ
GRIEEDTFIRDLVMMMSDIEEIKKATKKDKSEEKRVEFHLHTAMSQMDGIPNIGAYVKQA
ADWGHPAIAVTDHNVVQAFPDAHAAAEKHGIKMIYGMEGMLVDDGVPIAYKPQDVVLKDA
TYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFESFSNPHERLSETIINLTHITDDM
LVDAPEIEDVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGSSTNGVIDTLELSRT
INTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMLQQMKELGVLNHNEINKKL
SNEDAYKRARPSHVTLIVQNQQGLKNLFKIVSASLVKYFYRTPRIPRSLLDEYREGLLVG
TACDEGELFTAVMQKDQSQVEKIAKYYDFIEIQPPALYQDLIDRELIRDTETLHEIYQRL
MHAGDTAGIPVIATGNAHYLFEHDGIARKILIASQPGNPLNRSTLPEAHFRTTDEMLNEF
HFLGEEKAHEIVVKNTNELADRIERVVPIKDELYTPRMEGANEEIRELSYTNARKLYGED
LPQIVIDRLEKELKSIIGNGFAVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGASLIKEGQDIPFETFLGFKG
DKVPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHK
RGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQNSAWMTTHFDFH
SIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKEVMQIFSTPESLGVTEDEILC
KTGTFGVPEFGTGFVRQMLEDTKPTSFSELVQISGLSHGTDVWLGNAQELIKSGICDLSS
VIGCRDDIMVYLMYAGLEPSMAFKIMESVRKGKGLTEEMIDTMKENNVPDWYLDSCLKIK
YMFPKAHAAAYVLMAVRIAYFKVHHPLYYYASYFTIRASDFDLITMIKDKTSICNTVKDM
YSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKSQAFEFIIEGDTLIPPFISVPG
LGENVAKRIVEARDDGPFLSKEDLNKKAGLSQKIIEYLDELGSLPNLPDKAQLSIFDM
NT seq 4317 nt   +upstreamnt  +downstreamnt
ttggcaatgacagagcaacaaaaatttaaagtgcttgctgatcaaattaaaatttcaaat
caaatagatagtgaaatattaaattcaggtgaactgacacgtatagatgtttctaataaa
aatagaacatgggaatttcatattacattaccacaattcttagctcatgaagattattta
ttatttatacatgcaatagagcaagagtttaaagatatcgccaacgttacatgtcgtttt
acggtaacaaatggcacgaatcaagatgaacatgcaattaaatactttgggcactgtatt
gaccaaacagctttatctccaaaagttaaaggtcaattaaaacagaaaaagctgattatg
tctggaaaagtattaaaagtaatggtatcaaatgacattgaacgtaatcattttgacaag
gcttgcaatggaagtcttatcaaagcgtttagaaattgtgggtttgacttagataaaatt
gtttttgaaacaaatgacaatgatcaagaacaaaatttagcatctttagaagcacatatt
caagaagaagatgaacaaagtgcacgtctagctacagagaaacttgaaaaaatgaaggct
gaaaaagcgaaacaacaagataataacgaaagtgctgttgataaatgtcaaataggaaaa
ccaattcaaattgaaaatattaaacctattgaatcaattattgaagaagagtttaaagtt
gctattgaaggtgtcatttttgatattaatctaaaagaactaaaaagtggacgccatatc
gttgaaattaaagttactgattatactgattcattagtattaaaaatgtttactcgtaaa
aataaagatgatttagaacatttcaaagcgttgagtgttggtaaatgggttagagcacaa
ggtcgaatcgaggaagatacatttatcagagatttagtaatgatgatgtctgatattgaa
gaaattaaaaaagctacgaaaaaagataaatctgaagaaaaacgtgtagaatttcatttg
catactgcgatgagtcaaatggatgggataccaaatattggagcgtatgttaaacaagct
gcagattggggacatccagcaattgctgtaacagatcataatgttgtacaagcatttcca
gatgcccatgcagcagctgaaaagcacggtattaaaatgatatatggtatggaaggtatg
ttggttgatgacggtgttccgattgcatataaaccacaagatgtcgtattaaaagatgct
acatatgttgtgtttgacgttgagactacaggattgtctaatcaatatgataaaattatc
gagctcgcagctgtaaaagttcacaacggtgaaatcatcgataaatttgaaagttttagt
aatccacatgaacgattatcggaaacgataatcaatttaacgcatattaccgatgatatg
ttagttgatgcgcccgaaattgaagatgttttaacagaatttaaagaatgggttggcgat
gcgatattcgtagcacataatgcttcatttgatatgggctttattgatacgggatatgaa
cgtcttggatttggatcatctacaaatggtgttatcgatacattagaattatctcgtacg
attaatactgaatatggtaaacatggtttaaatttcttggctaaaaaatatggcgtagaa
ttaacacaacatcaccgtgccatttatgacacagaggcaacagcttacattttcataaaa
atgcttcaacaaatgaaagaattgggtgtattaaatcataacgaaataaacaaaaaactc
agtaatgaagatgcatataaacgtgcgagaccaagtcatgtaacgttaattgtacaaaac
caacaaggtcttaaaaatctatttaaaattgtaagtgcgtcattggtgaagtatttctac
cgtacacctagaattccacgttcattattagatgaatatcgtgagggattattggtaggc
acagcttgcgatgaaggtgaattatttacggcagttatgcaaaaagaccaaagccaagtt
gaaaaaattgccaaatattatgattttattgaaattcaaccaccggcactttatcaagat
ttaattgatagagagctaattagagatactgaaacattacatgaaatttaccaacgttta
atgcatgcaggtgacacagcgggtataccagttattgcgacaggaaatgcacattatctg
tttgaacatgatggtatcgcacgtaaaattttaatagcatcacaacccggcaatccactg
aatcgctcaactttaccggaagcacattttagaactacagatgaaatgttaaacgagttt
cattttttaggtgaagaaaaagcgcatgaaattgttgtgaaaaatacaaatgaattagca
gatcggattgaacgtgttgttcctattaaagatgaattatacacaccgcgaatggaaggc
gccaatgaggaaattagagaactaagctatacaaatgcacgtaaattgtatggcgaagac
ttacctcaaatcgttattgatagattagaaaaagaattaaagagtatcattggaaatggt
ttcgcagttatttatttaatttcacaacgtttggttaaaaaatcattagatgatggatat
ttagttggttctcgtggttcggttggctcaagttttgtagcaacaatgactgaaattact
gaggtgaatccattaccaccgcattatatttgtccaaattgtaaaacgagtgaatttttt
aatgatggttcagttggatcaggattcgatttacctgataaaacgtgtgaaacttgtgga
gcatcacttattaaagaaggacaagatattccatttgaaacattcttgggctttaaaggg
gataaggttcctgatatcgatttaaactttagtggtgaatatcaaccaaatgcgcataac
tatacaaaagtattatttggtgaggataaagttttccgtgcaggtacgattggtactgtt
gccgaaaaaactgcttttggttatgttaaaggctatttaaatgaccaaggtattcataaa
agaggcgctgaaatagatcggcttgtaaaagggtgtactggtgttaaacgtacaactgga
cagcatccagggggtattattgtagtacctgattacatggatatttatgattttacgcca
atacaatatcctgcagacgatcaaaattcagcatggatgacgacacactttgatttccat
tctattcatgacaatgtgttgaaactcgacatacttggtcacgatgatccgactatgata
cgtatgcttcaggatttatcgggcattgatccgaaaacgatacctgtagatgacaaagaa
gtcatgcaaatatttagtacacctgaaagtttaggtgttactgaagatgaaattttatgt
aaaacaggcacatttggcgtgccggaattcggaactggattcgttcgacaaatgttggaa
gacacaaagccaacttcgttttctgagttagtccaaatttctggattgtctcatggtaca
gatgtatggttaggcaatgcgcaggaattaataaaatcaggtatttgtgatttatcaagt
gtaattggttgtcgtgacgatatcatggtttatttaatgtatgctggtttagaaccatca
atggcatttaaaattatggaatcagtacgtaaaggtaaaggcttgactgaagaaatgata
gatacgatgaaagaaaataatgtgcctgattggtatttagattcatgtcttaaaattaag
tacatgttcccgaaagctcatgctgctgcatatgtgttaatggcagtacgtattgcgtat
ttcaaggtacatcatccgctttattattatgcttcttattttacaattcgtgcatcagat
tttgatttaattacgatgattaaagataaaactagcatttgcaatactgttaaagacatg
tattctcgttatatggatttaggaaaaaaagaaaaagatgttttaactgttttagaaatt
atgaatgaaatggcacatcgtggctatcgtatgcaaccaattagtttagaaaagagtcag
gctttcgaatttatcattgaaggagatacgctcattcctccatttatttcagtgccgggt
cttggtgaaaatgttgcaaaacgtattgttgaagcacgtgatgatggtccgttcttatca
aaagaagacttgaataaaaaagctggtctatcacaaaaaattattgaatatcttgatgag
ttaggttcattgccaaatttaccagataaagctcagctttcaatatttgatatgtaa

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