Solibacillus silvestris DSM 12223: SOLI23_03530
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Entry
SOLI23_03530 CDS
T04506
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssil
Solibacillus silvestris DSM 12223
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssil03032
]
SOLI23_03530
03400 DNA repair and recombination proteins [BR:
ssil03400
]
SOLI23_03530
Enzymes [BR:
ssil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SOLI23_03530
DNA replication proteins [BR:
ssil03032
]
Prokaryotic type
DNA Topoisomerases
SOLI23_03530
DNA repair and recombination proteins [BR:
ssil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SOLI23_03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
AMO84678
LinkDB
All DBs
Position
761785..763869
Genome browser
AA seq
694 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASIGHVRDLPRSQMGIDTENNYDPKYITIRGK
GPVLQELKTAAKKVKKIYLAADPDREGEAIAWHLATALNIDINSDCRVVFNEITKEAILE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVSLRLIIDREN
EIKSFEPEEYWSIDASFEKNKKQFDAFYYGNGKEKVKLTNEQQVKDILKGIKGSEFEVMN
VVKRERKRNASPAFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIELSKKEGAVGLITYM
RTDSTRISDTAKTEAKSYIETKYGKDFIAGEQKQAKAKANAQDAHEAIRPTSAMRTPEEL
KAILSRDQLRLYRLIWERFIASQMSPAVLDTVTVDLQNNDVLFRANGSQVKFAGFMKLYI
EGTDDQEEETNKLLPEMEIGDKVKSLEIEPKQHFTQPPPRYSEARLVKTLEELGIGRPST
YAPTLDTIQKRGYVQLDAKRFVPTELGEIVHQATLEFFPEIINIEFTAQMEQNLDEIEEG
ITQWVNVIDEFYKDFEPRVKYADEVMEKIEIKDEPAGEDCEKCGAPMVFKLGRYGKFMAC
SNFPDCRNTKAIVKPIDVKCPSCETGEIVERKSKTKRIFYGCNQYPECDFVSWDKPISRP
CPKCSALLVEKKLKKGVQIQCTNSECDYEETPSQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtaattgttgaatcacctgcaaaggcgaaaacaattgaacgatat
ttaggaaaaaaatataaagtaaaagcttcgattggacatgtacgtgatttaccacgtagt
caaatgggaatcgataccgaaaataattatgatccaaaatatattacgattcgcggtaaa
ggtccggtacttcaggaactgaaaacagcagcaaaaaaagtgaaaaagatttatctcgca
gccgatccagaccgtgaaggggaagcgatcgcatggcatttagccactgctttgaacatt
gatattaattcggattgccgcgtcgtatttaacgagattacgaaagaagcaattttagag
agcttcaagcacccgcgcccgattaatatggatttagtcgatgcacagcaagctcgtcgt
attttagaccgtctagtaggctacaatattagcccgatcctttggaaaaaagtaaagaaa
ggcttatcggcaggacgtgtacaatccgtttcattgcgtttgattattgaccgcgaaaat
gaaatcaaaagctttgagcctgaagaatattggtcgatcgatgcaagtttcgaaaaaaac
aaaaagcaattcgatgcgttttattacggaaacggtaaagaaaaagttaaattaacaaat
gaacaacaagttaaagatatattaaaaggtataaaaggctcagaatttgaagtaatgaat
gttgtaaaaagagaacggaaacgcaatgcttctccagcctttacgacttcttcactccaa
caggaagccgcacgtaaattaaacttccgcgccaagaagacaatgatgcttgcccagcag
ctttatgaaggtatcgagctaagcaaaaaagaaggtgcagtcggattaattacgtatatg
cgtactgactcgactcgtatttccgatacggcaaaaacagaggctaagtcgtatatcgaa
acaaaatacggcaaagatttcattgccggagaacaaaaacaggcaaaagcgaaggcaaat
gcacaggatgcccatgaagcgatccgtccaacaagtgcgatgcgtacaccagaggagctt
aaggcgattttaagccgtgaccagctgcgactgtatcgtttaatttgggaacgctttatc
gcgagtcaaatgtctccagctgtactcgatactgtaacagttgatttgcaaaacaatgac
gtattattccgtgcgaacggatctcaagtgaaatttgccggatttatgaaactttatatt
gagggtacagacgatcaggaagaagaaacgaataagcttttacctgaaatggaaatcggc
gataaagtgaaatcacttgaaatcgaaccgaaacagcatttcactcagccacctcctcgc
tattcggaggcgcgtctagtaaagacattggaagagctaggtataggtcgtccatcgaca
tatgcccctacactggatacaatccaaaagcgcggctatgttcagcttgatgcaaaacgc
tttgtaccaacagaacttggagaaatcgttcatcaagcaacattggaatttttcccggaa
atcatcaacattgaatttaccgcacagatggagcaaaatctggatgaaattgaagaaggc
attacacaatgggtaaatgtcatcgatgaattttacaaagactttgaaccgcgggtaaaa
tatgcggatgaagtgatggaaaaaatcgaaattaaagatgagcctgctggtgaagactgt
gaaaagtgcggtgcgccaatggtattcaagcttggacgttacgggaaatttatggcttgt
tccaacttcccggattgccgcaatacaaaagcgattgtaaaaccgatcgacgttaaatgt
ccttcatgtgagacaggtgaaattgtcgagcgtaaatccaaaacaaagcgcattttttac
ggatgcaatcagtatccggaatgtgacttcgtatcatgggataagccgattagtagacct
tgtccgaaatgtagtgcattattagtagagaagaaattgaaaaaaggtgttcagattcag
tgtactaacagtgaatgtgattatgaagaaacaccgtcacaataa
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