KEGG   Solibacillus silvestris DSM 12223: SOLI23_05165
Entry
SOLI23_05165      CDS       T04506                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
ssil  Solibacillus silvestris DSM 12223
Brite
KEGG Orthology (KO) [BR:ssil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssil03400]
    SOLI23_05165
Enzymes [BR:ssil01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     SOLI23_05165
DNA repair and recombination proteins [BR:ssil03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SOLI23_05165
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII Helicase_C DEDDh_C Chor_lyase DEAD_2
Other DBs
NCBI-ProteinID: AMO84993
LinkDB
Position
1080718..1083498
AA seq 926 aa
MKESQKYAIVDIETTGHSPASGDRMIQIAIVIMQGWEIVKKYSTFINPGKPIPLFIQDLT
NITDEDVKDALPFEAYADYIYELLEGAVFVAHNTDFDLNFLQAEFNRAGLSKWHGKKIDT
VELTKILFPMSLSYKLSDLANDFNILLQSAHRADDDALATAYLLKHCWEELLTLPLVTLE
QLHKRSFRLRTDLAQLFFDALVIKRNKAITDEGHVFYRKIAIRKMAPTPKCDGDKLVYPQ
TTDEKMTLLLNGIPDFEERPQQFQMMDSIWHALNTNAEHVIEASTGIGKTMGYLVPSIYY
AKKTNRKIGISTYTSHLLDQLMQNDIPILEQALGQPIKMALLKGMNHYIDVEKFEKELKT
QDESYDQTFTVLQTLIWLAKTETGDLSELNVSGGGQLLLDKIRKSALPKTTMPLYDFYSR
AIQNSHQADIIVTNHAMLLSDLVRNDQIFNSLGGWIIDEAHQFIQAAINQHEKIFTYMNW
KYLFGQIGIQEDEQLFYKIRRVAIKKQLLNYQTLDQLEKRYIQMVNAFDTAMAALLREVK
VANHQSKQQKIEVFISELQLGREVLIKVSLTVQQWVDEATELIRKFTSSVEELAPEHEYL
IEQWQYIVNEFTIKIAEWDDVFLNQDPDYSCWLELDQRSVPGSIQLYKKPIEVTSTIGKL
FDPIREKSGIVWTSGTLTVPSNERFITNQLGIDPSIPIEKLHADPSYYDGAEVYIVNDMP
DIQAVSQSEYIEEVAHAVTNTVRMTNGRCFVLFTSQDMLRKTVNLIQESELLSDYMIFAQ
GVTSGSRMRLLKSFQKFNHSVLFGTNSFWEGVDVPGDGLSAVIVVRLPFSSPEEPAFKAR
ANYLTQQGRNSFTELSLPDAIIRFKQGFGRLIRSSHDKGVFIVLDRRIETKSYGQQFIES
LPPISIQKLPLHSMVQSLGNWYNEKR
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgaaggaaagtcaaaagtatgcgattgtcgacatagaaactacaggacattctcctgca
agcggcgaccgtatgatacaaatcgcgatcgttattatgcaaggatgggaaatcgtaaaa
aaatattctacatttatcaatccgggaaaaccgatcccgttatttatacaggatttaact
aatattacagacgaagatgtaaaagatgctttaccatttgaggcgtatgcggattatatt
tacgagctgctggaaggggcagtatttgttgcccataataccgattttgacttgaacttt
ttacaggcagaatttaaccgtgcaggcctatcgaaatggcacggcaagaaaattgacaca
gtcgaactaacaaaaattttgtttccgatgtcgttaagctacaaattatcggatttagcg
aacgattttaatatcctgctgcaaagtgcacaccgagcggatgatgatgcactcgcaaca
gcttacctgcttaaacattgttgggaagagctgttaacattgccgctcgttactttggaa
caattgcataaacgttctttccgtttgagaacagatttggcccagctgttttttgacgcg
cttgtcatcaaacgcaacaaagcaataacggatgaagggcatgtcttttaccgtaaaatc
gcaattcgcaaaatggcaccaacgccaaagtgcgatggggataaacttgtttatccgcag
acgactgatgaaaaaatgactttattattaaatggaattcccgattttgaagagcgcccg
cagcagtttcaaatgatggacagcatttggcatgcactcaacacaaatgcggagcacgtt
atcgaagcatcaacgggcatcggaaaaacgatgggctatttagtgccatcgatttattat
gctaagaaaacaaatcggaaaataggaattagtacgtatacttctcatttgcttgatcag
cttatgcaaaacgatattccgatattggaacaggcacttggccagccgattaaaatggct
ttattaaaagggatgaatcactatatcgacgttgaaaagttcgagaaagagctaaaaacc
caggatgaatcctatgatcagacttttacagtactgcaaacactgatctggctggcgaaa
acggagactggtgatttaagtgagctgaatgtgtcaggcggcggtcagctgctccttgat
aaaatccgaaagagcgcattgccgaaaacgacaatgccgctctatgatttttactcacgg
gcaattcaaaatagtcatcaggcagacattattgtgacaaatcatgcaatgctgctaagt
gatctggttcgcaatgatcagatttttaattcattaggcggatggataattgatgaagcg
catcagtttattcaagctgcaatcaatcagcatgaaaaaatctttacttatatgaattgg
aaatatttatttggacaaattggtatacaggaagatgaacagctgttttataaaattcgt
cgggttgcaattaagaaacagctgctgaattatcaaacactggatcagctggaaaagcgc
tatattcaaatggtcaatgcgtttgatacagcaatggcggcattgcttcgagaagtgaag
gttgcaaatcaccagtctaaacaacagaaaattgaagtctttatttctgaattgcagttg
gggcgtgaagttttaataaaagtttcgctcacggtgcagcaatgggtggatgaggcgacc
gagcttatacggaagttcacttctagtgtggaggagcttgcaccagagcatgaatattta
attgagcaatggcagtatatcgtcaatgagtttacgattaaaattgcagaatgggatgat
gtatttttaaaccaggatcccgactattcatgctggctggaattggaccagcgcagtgtt
ccgggaagtatccagctttataaaaaaccgatcgaagtgacatcgacgattgggaaactt
tttgatccaatccgtgaaaaaagcggcattgtctggacatccggaacgttaacagtgcca
agtaatgagcgttttattacgaaccagctgggaatcgatccgtcgattccaattgaaaag
ctccatgctgacccgagttattatgacggggcggaagtgtatattgtcaatgacatgccg
gacattcaggccgtttcacaatccgaatatattgaagaggtcgcgcatgcggtcacaaat
acagtgcgaatgacgaatggtagatgttttgttttattcacatctcaggacatgctgcgt
aaaacggtcaacctaatacaggaaagtgaattgttaagcgactatatgatttttgcacaa
ggtgtcacatccggaagccgtatgcgcttattaaagtctttccaaaagtttaatcattcc
gtattatttggaacgaacagtttttgggaaggggtcgatgtgccgggtgacggtttgtct
gcagttattgtcgtgcggctgccgttttcttctccggaagagcctgcatttaaagcgcgg
gccaattatttaacacagcaaggacgcaattcctttacagagctttcgctgcctgatgct
attatccggttcaaacaagggttcggccggttaattcgttccagccatgataaaggggtg
tttatcgttttggatcgccggattgaaacaaaatcatacggacagcagtttatcgagtca
ttaccgccaatttctatacaaaaactgcctctacacagtatggtacaaagcttaggaaat
tggtataatgaaaaacgatga

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