KEGG   Sphingomonas sinipercae: G7078_10325
Entry
G7078_10325       CDS       T07461                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
ssin  Sphingomonas sinipercae
Pathway
ssin03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ssin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    G7078_10325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssin03400]
    G7078_10325
DNA repair and recombination proteins [BR:ssin03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     G7078_10325
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QIL03135
UniProt: A0A6G7ZQD2
LinkDB
Position
complement(1995690..1996595)
AA seq 301 aa
MAARPIWRGQIRLALVSIPVELYSATKSGASIQFHQVHEPSGKRIKYEKVVPGIGPVDRD
EIVKGYEVSKGHYVLLDPEEIEAVKLESKKTLDLVQFVDITDIDAMYYEKPYYVVPADDL
AEEAFVVLREALRQAKKVGIGQLAMRGQEYVVAIKPCGRGMLMETLRYADEVNKANSYFR
DIGDHKPDEDLLDLASTLIEKKAGEFDASEFHNRYVDALHKLIEEKQRKKGEKVMQDPDA
DAPVPKGSNVIDLMAALKKSLGDSGDEAKPKAKGKAKAAPRSAARPRSTGTKKAASGGRK
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atggctgctcggcccatctggcgaggacaaatcaggctggcgttggtttcgatccccgtc
gagctctattcggcgacgaaaagcggggcttcgatccagttccaccaggtgcatgagccg
tccggaaagcgcatcaagtacgagaaagtcgtccctgggatcgggcccgttgaccgcgac
gaaatcgtcaagggctatgaggtgtcgaaggggcattacgtcctgctcgatcccgaagaa
atcgaagcggtgaagctggagagcaagaagacgctcgacctcgtccagttcgtcgacatc
accgacattgacgccatgtattatgaaaagccttattacgtcgtgcccgcggacgacctg
gccgaggaagccttcgtcgtgcttcgcgaggcgctgcggcaggcgaagaaggtcggcatc
ggccagctcgccatgcgcgggcaggaatatgtcgtcgcgatcaagccgtgcggacgcggg
atgctgatggagacgctgcgctacgccgacgaggtcaataaggcgaacagctattttcgc
gacatcggcgaccacaagccggacgaggacctgctcgacctcgcctcgacgctgatcgag
aagaaggcgggcgagttcgacgcgtcggaattccacaaccgctatgtcgacgcgctgcac
aagctcattgaagagaagcagcgcaagaaaggcgagaaggtcatgcaggatcccgacgcc
gacgcgccggtgcctaaggggtcgaacgtcatcgacctgatggctgcgctgaagaaaagc
cttggcgacagtggtgacgaagccaagccgaaggcgaagggcaaggcgaaagccgcgccg
cgcagcgctgcccggccgcgctcgaccggcaccaagaaggcggcgtccggggggcggaag
cgctaa

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