Sclerotinia sclerotiorum: SS1G_14057
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Entry
SS1G_14057 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SS1G_14057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_14057
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SS1G_14057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
5481058
NCBI-ProteinID:
XP_001584960
UniProt:
A0A1D9QDZ6
A7F8X6
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MDIDEDDDFYAPEESVPLSSNDANPAETAQHEVRSEQQEEDLEEGEEEDEGEDSDSDIDI
ITEKKDGAPPPSKPKGANYDNLPNDLPSHTKSTAEADAKAPAVKTEKPKKASETQAISGA
ELPGLAISKIDVNAKPMYEPAGKPITQINIDEDLNENDKPWRRPGTDISDYFNYGFDEFT
WALYANKQESLRSEFDPNKIAQNNKKMFEDMNMMMAMGGMPGMPAGGGMPGMEGMTPEMM
QQMQQMMAASGMDPSQMDPSMFGGANPAGGAGGFGGQFGGGGFDQNMMASGGESSNRGGG
FGRGRGRRGRGNW
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatgaagatgatgatttttatgcgccggaggagagtgtgccactttcatca
aatgatgccaatccagcagaaactgcgcagcatgaagtcagatccgaacagcaggaggaa
gatttagaggaaggcgaggaggaagatgagggagaagatagtgattcggacatagatatt
ataacagaaaagaaagatggcgctccaccaccctcaaaacctaaaggcgcaaactacgat
aatcttccaaatgatcttccgagtcacacaaaatctacggctgaagcagatgcgaaagct
cccgcagtgaaaactgagaaaccaaagaaagcctccgagactcaagcaatatctggtgca
gaattacctggtttggcaatatcgaaaatcgatgtaaatgcaaagcccatgtatgagcca
gccggaaaaccaattacacaaatcaatattgatgaagacctcaatgaaaatgacaaacct
tggagaaggcccggcacagacatatcggattatttcaactacggttttgacgagtttacc
tgggctctctacgccaacaaacaagaatcattgcgctcggaatttgaccccaataaaatc
gcacagaataacaagaagatgtttgaggatatgaatatgatgatggcaatgggtggaatg
cccggtatgccagctggaggcggaatgcctgggatggagggaatgacaccagaaatgatg
caacaaatgcaacaaatgatggcggcaagtgggatggatcctagtcagatggacccctca
atgtttgggggcgcgaatccagcaggtggggcgggtggttttggaggtcaatttggtggt
ggaggttttgatcaaaatatgatggcgtcaggcggcgaaagtagtaatcgtggaggaggc
tttggaagaggcagaggcagaaggggaagaggaaattggtag
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