Sediminispirochaeta smaragdinae: Spirs_3145
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Entry
Spirs_3145 CDS
T01287
Name
(GenBank) radical SAM enzyme, Cfr family
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssm03009
]
Spirs_3145
Enzymes [BR:
ssm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Spirs_3145
Ribosome biogenesis [BR:
ssm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spirs_3145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
ADK82243
UniProt:
E1R5B5
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All DBs
Position
3368867..3369937
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AA seq
356 aa
AA seq
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MSPSYYPFPEGTDCASGLFPDEICRVFHLSPAFRGKQVFRALQQGISSWTQISTLSLNDR
NRLSEEASLFSSVPTRFDEASDGSAKLLLELIDGRFVESVLLVDESGRKTACLSSQVGCA
MRCAFCRTGTMGLLRNLSTGEILEQYYHLKNRYGEISNIVFMGMGEPLANLPPVQKAIAI
LNHPEGPGIGIRKITVSTCGIVDGIRSLSETALIPRLACSLVTADPKLRQRLMPVSKANP
LPELKQALHFYQEKSKRRITLECVLLGGINSAEEQAQGVADFARGLSVLVNVIPWNPTEG
LDFRPPSDQEIIRYRKRLEQAGIAVSRRYRRGSEINGACGQLAVLENRPDSSDPCR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgtcatattaccccttcccggaaggcaccgactgcgcttccggcctatttccc
gatgaaatctgtcgcgtatttcacctctcccccgcttttcgggggaaacaggtgttcagg
gcactccagcaaggaatatcctcctggacgcagatatcaaccctatccctgaacgaccga
aaccgactgagtgaagaagcttcccttttttcttccgtgcctacgcggttcgacgaggca
tccgacggcagtgcgaagttattattagaacttatcgacggacgctttgtggaatcggta
cttctggtagatgagagcggccgcaaaacagcctgcctctccagccaggtcggctgcgcc
atgagatgtgctttctgtcggaccggaaccatgggtcttctgaggaatctcagtacagga
gaaattctcgaacagtattatcacctgaaaaatcgttatggggagatatcgaatattgtc
tttatggggatgggagaaccccttgcaaatcttcctccggtacaaaaggcaatagcgatt
cttaaccatccggaaggcccaggtatcggcataaggaaaataacggtctccacctgcggc
atcgtcgacggaatccgttctcttagcgaaacagcattaattccccgtcttgcctgttcc
ctggtaaccgcagatccaaagttacgccagaggcttatgccggttagcaaagcaaacccc
ttaccggaactaaaacaggcattacacttctatcaagaaaaaagcaagcggcgaataacc
ctggaatgtgtacttctcggcggcattaatagtgcagaggaacaggcccaaggcgtagct
gacttcgcaaggggtttatcggtattggtaaacgtcattccctggaaccctacggaaggg
cttgatttccggccgccgagcgaccaggagatcatccgatacagaaagcgcctcgaacag
gccggtatcgccgtttccaggcgctaccgacgcggttctgaaattaacggtgcctgcggt
cagttagcggtcctcgagaaccgccctgattcgtctgacccctgcagatga
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