Shigella sonnei Ss046: SSON_1133
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Entry
SSON_1133 CDS
T00274
Symbol
ycfS
Name
(GenBank) conserved hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SSON_1133 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssn01002
]
SSON_1133 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssn01011
]
SSON_1133 (ycfS)
Peptidases and inhibitors [BR:
ssn01002
]
Cysteine peptidases
Family C82
SSON_1133 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SSON_1133 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AAZ87858
ShiBASE_China:
SSO1133
UniProt:
Q3Z304
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Position
complement(1210728..1211546)
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AA seq
272 aa
AA seq
DB search
MENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINI
AELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQ
GIELPTVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTL
FSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDA
AQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatgacggtggttctctggaagccatcgccaaaaaatataacgtcggctttctc
gctctgttacaggctaaccccggcgttgatccttacgtaccgcgcgcgggcagcgtgtta
acgatcccgttgcaaaccctacttccagacgcgccgcgcgaaggcattgtgatcaacatt
gcggagctgcgtctctattactacccgccgggtaaaaattcggtaaccgtgtatccaata
ggtattggtcagttaggtggtgacacgctgacaccgacaatggtgaccaccgtttcagac
aaacgtgcaaacccaacctggacgccaacggcaaacatccgcgcccgttataaagcacag
ggaattgagttgcctacggtagtgccggctggaccggataacccaatgggccatcatgcg
attcgtctggcggcctatggcggcgtttatttgcttcacggtacgaacgccgatttcggc
attggcatgcgggtaagttctggctgtattcgtctgcgggatgacgatatcaaaacactc
tttagccaggtcaccccaggcaccaaagtgaatatcatcaacactccgataaaagtctct
gccgaaccaaacggtgcgcgtctggttgaagtacatcagccgctgtcagagaagattgat
gacgatccgcagctgctgccaattacgctgaatagcgcaatgcaatcatttaaagatgca
gcacaaactgacgctgaagtgatgcaacatgtgatggatgtccgttccgggatgccggtg
gatgtccgccgtcatcaagtgagcccacaaactctgtaa
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