KEGG   Shigella sonnei Ss046: SSON_1133
Entry
SSON_1133         CDS       T00274                                 
Symbol
ycfS
Name
(GenBank) conserved hypothetical protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
ssn  Shigella sonnei Ss046
Pathway
ssn01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:ssn00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    SSON_1133 (ycfS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssn01002]
    SSON_1133 (ycfS)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ssn01011]
    SSON_1133 (ycfS)
Peptidases and inhibitors [BR:ssn01002]
 Cysteine peptidases
  Family C82
   SSON_1133 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:ssn01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   SSON_1133 (ycfS)
SSDB
Motif
Pfam: Ldt_C YkuD LysM
Other DBs
NCBI-ProteinID: AAZ87858
ShiBASE_China: SSO1133
UniProt: Q3Z304
LinkDB
Position
complement(1210728..1211546)
AA seq 272 aa
MENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINI
AELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQ
GIELPTVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTL
FSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDA
AQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL
NT seq 819 nt   +upstreamnt  +downstreamnt
gtggaaaatgacggtggttctctggaagccatcgccaaaaaatataacgtcggctttctc
gctctgttacaggctaaccccggcgttgatccttacgtaccgcgcgcgggcagcgtgtta
acgatcccgttgcaaaccctacttccagacgcgccgcgcgaaggcattgtgatcaacatt
gcggagctgcgtctctattactacccgccgggtaaaaattcggtaaccgtgtatccaata
ggtattggtcagttaggtggtgacacgctgacaccgacaatggtgaccaccgtttcagac
aaacgtgcaaacccaacctggacgccaacggcaaacatccgcgcccgttataaagcacag
ggaattgagttgcctacggtagtgccggctggaccggataacccaatgggccatcatgcg
attcgtctggcggcctatggcggcgtttatttgcttcacggtacgaacgccgatttcggc
attggcatgcgggtaagttctggctgtattcgtctgcgggatgacgatatcaaaacactc
tttagccaggtcaccccaggcaccaaagtgaatatcatcaacactccgataaaagtctct
gccgaaccaaacggtgcgcgtctggttgaagtacatcagccgctgtcagagaagattgat
gacgatccgcagctgctgccaattacgctgaatagcgcaatgcaatcatttaaagatgca
gcacaaactgacgctgaagtgatgcaacatgtgatggatgtccgttccgggatgccggtg
gatgtccgccgtcatcaagtgagcccacaaactctgtaa

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