Streptomyces solisilvae: I1A49_23370
Help
Entry
I1A49_23370 CDS
T07406
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ssoi
Streptomyces solisilvae
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoi03021
]
I1A49_23370 (sigM)
Transcription machinery [BR:
ssoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I1A49_23370 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Rnk_N
DUF746
HTH_23
HTH_16
Motif
Other DBs
NCBI-ProteinID:
QPI57461
LinkDB
All DBs
Position
5801536..5802225
Genome browser
AA seq
229 aa
AA seq
DB search
MDDATIGGASDSELLARHVDGDPDAFSEIVRRHRDRLWAVALRTLGDREEAADAVQDALV
SAYRAAHTFRGQSAVTTWLHRITVNACLDRARKAASRRTSPVDDTERLEQLLEPHESAAA
PAERGDLHRELLRALRTLPPEQRAALVLVDMQGYPVAEAAKVLEVPTGTVKSRCARGRAR
LLPLLSHLHPSGRGSSPSGVGRNRTQGTSVPPTAGPNDTDAVKGGGGRA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
ttggacgacgccaccatcggcggggcgagcgacagcgagctccttgcccggcacgtcgac
ggcgacccggacgccttcagcgaaatagtgcggcgccaccgcgacagactctgggcggtg
gcgctgcgcaccctcggcgaccgcgaggaagcggccgacgcggtccaggacgcgctcgtc
tccgcctaccgcgccgcgcacaccttccggggccagtccgccgtgacgacctggctccac
cgcatcacggtcaacgcctgtctggaccgggcccgcaaggccgcctcccgtcgtacctcc
cctgtcgacgacaccgagcggctcgagcaacttctggaaccccatgaatcagccgccgct
cccgccgagcgcggtgatctccaccgcgaactgctgcgggcgctgcgtaccctccctccc
gagcagcgcgcggccctggtgctggtcgatatgcagggctaccccgtcgccgaggcggcg
aaagtcctggaggttcccaccggcacggtgaagagccgctgcgcccggggccgcgcacgg
ctgctgccgctgctctcacatctccaccccagcgggaggggtagctcaccctcgggcgtg
ggaaggaaccggacgcaggggacgtccgtcccaccgacggcaggaccgaacgacacagat
gccgtgaagggcggaggtgggcgagcgtga
DBGET
integrated database retrieval system
