Shewanella spartinae: K0I31_10130
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Entry
K0I31_10130 CDS
T09209
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sspa
Shewanella spartinae
Pathway
sspa00550
Peptidoglycan biosynthesis
sspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0I31_10130 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspa01002
]
K0I31_10130 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sspa01011
]
K0I31_10130 (dacB)
Enzymes [BR:
sspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0I31_10130 (dacB)
Peptidases and inhibitors [BR:
sspa01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
K0I31_10130 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sspa01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
K0I31_10130 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
QYJ95681
LinkDB
All DBs
Position
complement(2271551..2273176)
Genome browser
AA seq
541 aa
AA seq
DB search
MFTRLTSGLSALPLNFPSLLTKAIPAAKPFALSLAVAAALIPAASNAGTDANTNTNTNTK
QLDSKGYDNQSYYDNLLSVIAPPHSQLSILAQDLSTDAILYQHNADTLLLPASTQKLLTA
VAAMRVLGEEFSFATQFSTKGRLSHGVLTGDLYLSFSGDPTLTTDDLRAMLKSLKDAGIH
TVKGNLLLVGQAKEQTRAPGWVWDDLGICYAAPVSSFIVNQNCVKGQLKPKLASSASQLN
FPRYLPIKVSTTAVFDKTQQEPFCELNLARLPDNHYHISGCYPGDKPLNLAIAVDDPALY
AKEMLTRMLKSAHIKMSGQVAIAHRTPIGLKPLVTHKSERLEALLRTMLLDSDNLIADSL
FKAVGAHYYKVPESFHAGARAVKAILEADGIDLSHTQIIDGSGLSRYNLISARQLAEVLG
LMAKDEKLRPLIELLPVAGVSGTLNYKRGFHQAPLMNKVSAKTGSMQGVDNLAGYLSLDA
SHQLLFVVMENGQSQESKKQSPAPFSALFLQSLLDNQGQIVKSQGNENEDKKSTPKTLTA
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaagattgacaagcgggctaagcgcccttccccttaatttcccaagcttgctg
actaaggcgattccggctgcaaaacctttcgccttgtctttagctgtcgcggctgcctta
atacctgcagccagcaatgccgggaccgacgctaataccaataccaataccaataccaag
cagcttgatagcaagggttatgataatcaaagctattatgacaacctcttgtcggtgatc
gcgccgcctcactcgcaactgtctattttggctcaagatctcagcaccgacgcgatactg
tatcagcacaacgccgataccctgttgctgcctgccagtacgcaaaaattactcacggcc
gtcgccgcgatgcgggtattgggtgaagagttcagctttgcgacccaattttcaaccaag
gggcgcttgtctcacggtgtgttaacgggcgatctctatctctcctttagtggcgacccc
accttaaccacagacgatctacgagctatgttaaagagcttgaaagatgcaggcattcat
accgttaaagggaacctcttgcttgtggggcaagccaaggagcagacgcgcgcccccggc
tgggtgtgggacgatcttgggatctgctacgccgcgccagtttccagctttatcgtcaat
caaaattgcgtcaagggccagttaaagccaaagctggcaagcagcgccagccaactcaac
tttccgcgatatctgcccatcaaggtgtcgacaaccgcggtatttgataagacgcagcaa
gagcccttctgtgaactcaacttagctaggctgcccgacaatcattaccacatcagtggc
tgttatccgggtgataagccgcttaatctggcaatcgccgtggatgaccctgcgctctac
gccaaagagatgctaacgcgcatgttaaagagcgcccacatcaaaatgagcggacaagta
gctattgcgcacagaacgccgataggccttaagcccttagtgacccacaaatcggaaagg
ctcgaggcgctccttcgtaccatgctgctcgattcggataacttgattgccgacagcctg
tttaaagccgtaggcgcacactattacaaggtgccagaaagctttcatgccggcgccagg
gccgttaaggcgatactcgaggcggacgggatagatctcagccacacgcagatcatcgat
ggctcgggcctttctcgctataaccttatctcggccaggcaactggctgaggtcctgggc
ctgatggcgaaggatgaaaaattacgccccctcattgagctgctgccggtcgccggggtt
agcggtaccctcaactataagcgcggctttcatcaagctcccttgatgaataaggtttct
gccaagacaggttctatgcagggtgtcgataatttagcgggttacctttcactcgacgca
agtcaccaattgctcttcgtggtcatggaaaatggccagagccaagagagtaagaaacaa
agccctgcgccctttagcgccctcttcctgcaaagcctgctggataatcaagggcagata
gtcaaaagccaaggtaatgaaaacgaggataagaagagcaccccaaaaacgctcactgcg
caataa
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