Shewanella spartinae: K0I31_10505
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Entry
K0I31_10505 CDS
T09209
Name
(GenBank) efflux RND transporter permease subunit
Organism
sspa
Shewanella spartinae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QYJ92097
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Position
2359636..2362818
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AA seq
1060 aa
AA seq
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MPDPNKGMIAWFARNSVAANLLMIIIIIGGLLTASTIRKQFFPQTETNWVEFSAFYPGAA
PQEVEEGITIKVEEALERVQGLKRVITYSNRNSASGYFRIEDSYDPQVVLDEIKSEIDSI
SSFPDGMERPRVERIKNRQEVFYISLYGDLPPKQLKEFGEKIHDELMQLPLVNITEFYGG
LDYEMSIEVSKDKLREYNLSFNDVAKAVRGYSRNMSAGQIKAENGYISLRVQNQAYVGYE
FENLPLITLEDGTKLLLGDVANVVDGFEEGIQYSKFNGKNSVTFFVGASNDQSMTDVAKV
VNQYVEDKQASLPQGLNLETWVDMTYYLQGRLDLMLDSMKSGAILVFIMLALFLRVRLAF
WVMMGLPVCFLGTLLLMPTAMIDVTINVISLFAFILVLGIVVDDAIVMGESAHTECEEKG
QSIDNVIRGVKKVAMPATFGVLTTIAAFLPITMDDGPSSAFGQSIGYVVILCLLFSLVES
KLILPAHLAKMKHKTQVKPGSKNPINLLRIGVNYLQAKVDNGLQFVIYRLYKPSLTLSVK
YRYMIIALFISLILVCAGLYSGGILRYVGQPKIPHDFPRISVEMNLDSSEQATLSAALAI
EAALHKVDDQLEQEFGQRMIADMQVDLQGRTRAQVMTKLVTPELRPIDTFALAERWRAAM
PQIPGVKSFNIQDNLFGGGRDDGDISFRLEGKDEAQLIAAAKALKAKLNSLQGVGDVNDS
RQSSAKEVQFSLKPLANSVGLTLADVASQVSASFYGLEAQRILRNGEEIKVMLRYPEEQR
NSIAHVTEVMILTPQGAEIPLSEVAEIQVTQGVSGIRRENGNRTINVWASVDASQAEPFK
LAQDIRDNFIPELLRQYPRVKSEVAGNIQEQIDSANTQMRNFIISLLVIYSLLAVPLKSY
VQPMMIMSVIPFGIIGSVLGHMLLGIDLSALSLFGIIAAAGVVVNDSLVMVDYINRARLA
GISMKVAVIEAGCRRFRAILLTSLTTFIGLVPIMSETSMQAQMVIPMAVSLAFGVLFATI
VTLVLIPCLYVAIEDTKSAFSWIYNRITGVKVNQEVVSEQ
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgccagatccaaataaaggcatgatcgcctggtttgcccgcaacagcgtggcggcaaac
ctgctgatgatcatcatcattatcggaggtctgctgaccgccagcacgatacgcaaacag
ttttttccccagacagagaccaactgggtcgagtttagcgccttctatcccggcgccgcg
ccccaagaggtggaggaagggatcaccatcaaggtcgaggaagccctggagcgggtacaa
ggcctgaagcgggtgatcacctattctaaccgtaactcggcatcgggctattttcgtatc
gaagactcctacgaccctcaggtggtcttggatgagatcaaatctgagatcgattctata
tcgagcttccccgatggtatggaacgaccacgggttgagcgcatcaagaatcgacaggag
gtgttttatatcagcctctatggcgacctgccgccaaagcagctcaaagagttcggcgag
aagatccacgatgagttgatgcagctgccgctggtaaacatcacagagttttatggcggg
ctggactatgagatgtccatcgaggtcagcaaggataagctgcgcgaatacaatctctcc
ttcaacgatgtcgccaaggcggttcgcggttattcacgcaacatgtcggccggccaaatc
aaagccgaaaacggttacatcagcctgagggtgcaaaatcaagcctatgtcggttacgag
tttgagaatctgccgctgatcaccctagaagatggcaccaagttgctgcttggcgatgtg
gccaatgtggtcgacggtttcgaagagggtattcaatactccaagttcaacggtaagaac
tcggtgactttcttcgtgggcgcatcaaacgatcagagcatgacggatgtcgctaaggtg
gttaaccaatacgtcgaagataaacaggcttcactgccccagggcttgaacctggaaacc
tgggtcgatatgacctattacctgcagggtcgtctggatcttatgctcgacagcatgaag
agcggcgccatcttggtgtttatcatgttggccctcttcctgcgggttcgcctcgccttt
tgggtgatgatggggctgcccgtctgcttcttaggtacactgctgctgatgccgaccgcc
atgatagatgtcaccatcaacgtgatcagcctgtttgccttcattctagtgctggggata
gtggtcgacgatgccatcgtcatgggcgagagcgcccataccgagtgtgaagagaaaggc
cagagcattgacaatgtgatccgcggcgtgaagaaagtagccatgcccgccaccttcggc
gtgttgaccacaattgccgccttcctgcccatcaccatggacgatggcccctcgtcggcc
ttcggccagtcaatcggctatgtggtgatcttatgtctgctgttttccctggtggagtct
aagctcatcctaccggcgcacttagccaagatgaaacataaaacccaggttaagccgggc
tcgaagaatcccatcaacctgctgcgtatcggggtcaattatctacaggccaaggtggac
aatggactgcagtttgtgatctatcgtctgtacaaaccctcgctgacattgtcggtgaaa
tacagatatatgatcatcgccctgttcatctccttaattctggtctgcgccggcctctat
tccggcgggatcctgcgctacgtgggacaacctaagatcccccatgatttcccacgtatc
agcgtcgagatgaacctggactcatcagagcaagcgaccctgtctgccgcattggcaatc
gaggcggcgctgcataaggtcgatgatcagctggaacaagagtttggccaacgaatgatc
gccgacatgcaagtcgatcttcaaggcagaacccgtgcccaggtgatgaccaagctagtg
accccagagctaaggcctatagatacctttgccctcgccgagcgctggcgtgcagccatg
ccgcagatcccaggggtgaagtccttcaatattcaggataacctcttcggtggcggccgc
gacgatggcgacatcagcttccgtctcgaaggcaaagacgaggcacaactcatcgccgcg
gccaaggcattaaaggctaagcttaacagcctgcagggcgttggcgacgtcaatgacagc
cgccagtccagcgccaaagaggtgcaatttagccttaagccgctggccaacagcgtcggc
cttacccttgccgatgtcgcctctcaggtcagcgccagcttctacggtctcgaggcccag
cgtattttacgcaacggcgaggagatcaaggtgatgctgcgctatcccgaggagcagcgt
aactctatcgcccatgtgaccgaggtgatgatcctcacgccacagggcgcagagatcccg
ctctccgaggtcgcagagatccaggtgacgcaaggagtcagcggtatccggcgtgaaaac
ggcaaccggaccatcaacgtctgggcctcggtggacgcctctcaggccgagccatttaag
ctagcccaggacattcgtgataactttatccccgagctgctgcgtcagtatcctagggtg
aagagtgaggtggcaggtaacattcaggagcagatcgacagcgccaatacccagatgcgt
aacttcatcatctcgctgctggtgatctatagcctgttagccgtgccgcttaagtcctat
gtgcagccaatgatgatcatgtcagtgatcccctttggcatcataggctctgtgcttggc
cacatgctacttgggatagacctaagtgccctctccctattcggcatcattgccgccgcc
ggggtggtggtgaatgactccttggtgatggtggattacatcaaccgcgcccgactggcc
ggtatcagcatgaaggttgccgtgattgaagcaggttgtcgtcgtttcagggcaattctg
ctcacctcgctgaccacctttatcggcctggtacccatcatgagcgagaccagcatgcag
gcgcagatggtgatccctatggcggtgtcgctcgccttcggcgtactgtttgccactata
gtgactctggtactcattccatgtctctatgtggcaatcgaagataccaagtctgcgttt
agttggatatacaaccgaattaccggtgttaaggtgaatcaagaagtggtgtcagagcag
tag
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