Sphingobacterium spiritivorum: I6J01_05775
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Entry
I6J01_05775 CDS
T07566
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspi
Sphingobacterium spiritivorum
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
I6J01_05775
Enzymes [BR:
sspi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
I6J01_05775
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
DUF6452
Motif
Other DBs
NCBI-ProteinID:
QQT36932
LinkDB
All DBs
Position
complement(1360611..1362458)
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AA seq
615 aa
AA seq
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MKGYKAALLLLLFIHSGYVMAQRAMEYLDRGLSLTNVDPQHVLLSWRLLGTDHPNTGFNV
FQKQTNGKDILINPTPITKSTNLLVPVAADPATFYVETLRENKANEYSGTITFHPDDRKN
YTSITLQPLDGYRVNDASAADLDGDGIYELILHRTGRSKDNSQEGMTDHPILEAYKLNGT
FLWRIDLGINIREGAHYTQFMVYDLDGDGRAELVCKTADGTKDAKGKIIGDEKKDWRNQV
GRILDGPEYLTVFDGLTGAEQHTVGYIPDRYPVDGWGIGSHNDSKGNRADRFLAAVAYLD
GEHPSVLMCRGYYGRAAIVAWDFVDGKLRQRWKFDSRNGDSPYSGQGFHNLSVADVDNDG
RDEIVYGSMTIDDNGKALYSSGLGHGDANHVGDFDPDSPGLEIFTIHEHPKEDKPGAVLR
RASDGKVLWAKAYGVDVGRGVADNIDDSNPGAEMWFSGDRNLYNSAGKRIGRAPNSANFL
IWWDGDLERELLNGTAVSKYGKGEIFRAQGCVSNNGTKSTPVLSADLFGDWREEVIFASE
DQTELRIYATPHLTHHRLYTLMHDPQYRLSIAWQNVGYNQPPHTSYFVGKDMAPIRQPNI
TIVKPVYPKDETIRP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttataaagccgccttattgttgttactattcatacatagcggatatgtgatg
gcacaacgcgctatggagtatctggaccgcggattgtccctcaccaatgtggatcctcag
catgtattgctgagttggagattgctgggaactgatcatccaaataccggattcaatgtg
tttcaaaaacagacaaacggcaaagatatactcatcaatccgacaccgatcacaaagagc
actaatttacttgtacctgtcgcagcagatcctgccactttctatgtcgaaacattaagg
gaaaataaggctaatgagtactccggaacgattaccttccatcccgatgaccgaaagaat
tatacgagtataacactgcagcctttggatggctatcgggtgaatgatgccagtgcagcc
gatctggatggagatggaatttacgaattgattctgcatcgtacaggaaggagtaaggat
aactcgcaggaaggaatgacagatcacccgatcctggaagcttataaactgaatggcact
tttctctggcgtattgatctgggaatcaatatccgggaaggagcgcattatacccaattt
atggtgtatgatcttgacggagacggacgggctgaacttgtttgcaagacagctgacgga
acaaaagatgcaaagggtaagataataggagatgaaaaaaaagactggcgcaatcaagta
ggcaggatattggacggaccggagtatctcaccgtattcgatggtctcaccggggcagaa
cagcatactgtcggttatatcccggatcgttatccggtagacggatggggaatcggcagc
cataatgatagtaagggaaatcgtgctgatcgttttttggctgcggtagcttatctggat
ggtgaacatccaagtgtattgatgtgcagaggatactatggtcgtgcagcgattgtggcc
tgggattttgtagatggaaaactccgccagcgctggaaatttgattcccggaatggtgac
agtccctattcaggacaaggatttcataatcttagtgttgcagatgtagataatgatggt
cgggacgagattgtatatggctcaatgactatagatgataatggcaaggctttatacagc
agcggattaggacatggagatgcgaatcacgtcggagactttgatccggacagtccgggt
ctggagatctttacgattcacgaacatcccaaagaagataaaccgggtgcagtactaaga
agagcatctgatggcaaagtgttgtgggcaaaagcttatggtgtagatgtagggcgtgga
gtagcggataatattgacgactcgaatccgggagcagaaatgtggttttcaggagacaga
aatttatataacagtgccggcaaacggatcggccgggcgcctaattctgccaattttctg
atctggtgggatggcgatctggaaagagaactgctaaacggtactgcagtttccaaatat
ggcaaaggagaaattttcagagcacaaggctgtgtatcgaacaacggaactaaatcaact
ccggttttaagcgcagacctgttcggagattggagagaagaagttatttttgccagcgaa
gatcaaaccgagctgcgcatatatgcaacaccacatctaacccatcacaggttgtatacc
ttgatgcatgatccgcagtacagactgagtatcgcctggcagaatgtaggatataatcag
ccacctcataccagttattttgttggtaaagatatggcacctatccggcagccgaatatt
acaattgtaaaacctgtatacccgaaagatgaaacgatcaggccttaa
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