KEGG   Sphingobacterium spiritivorum: I6J01_08850
Entry
I6J01_08850       CDS       T07566                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
sspi  Sphingobacterium spiritivorum
Pathway
sspi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sspi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    I6J01_08850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sspi03400]
    I6J01_08850
DNA repair and recombination proteins [BR:sspi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     I6J01_08850
SSDB
Motif
Pfam: Ku DUF5780
Other DBs
NCBI-ProteinID: QQT37493
LinkDB
Position
complement(2127752..2128507)
AA seq 251 aa
MRAIWTGAIGFGLVNIPVKIYSATQSSSLDLDMLDRKDKSNIKYKRVNEKTGKEVAWENI
VKGYMLKDKYVVLEDADFEDASPEKNKMINLRSFVKLEEIDSIYFDTPYYLEPQKGGEKA
YQLLLKGLEKSKTAGLGSFVMRNIENLVIIKPYQNMLLLNKLRFEEEIRSAEELKIPGAS
KIKKEEMDMALQLIKQHSHSFDISGYKNEYTRDLLKIIKQKEKGKRATIRKMTVENTKAA
DLLAQLKASLA
NT seq 756 nt   +upstreamnt  +downstreamnt
atgagagcaatttggacaggagcaataggttttggacttgttaatatcccggttaaaata
tacagtgccacacaaagcagttcactggatctggacatgctggatcggaaagataaatca
aatatcaagtacaaaagggtgaatgagaagacaggtaaagaagtcgcatgggaaaatatt
gtcaaaggatatatgctgaaagacaaatatgtcgtactggaggatgcggactttgaagat
gcaagtcctgaaaaaaataaaatgatcaatctccggtcctttgtcaaacttgaagaaata
gatagtatttattttgatactccctattatttagagcctcagaaaggtggagagaaagcc
taccagttactcttaaaaggattagaaaaaagcaaaactgcaggcttaggatcctttgtt
atgcgcaatattgaaaatctggtcattataaaaccctaccagaatatgcttttactaaat
aagctccgttttgaagaagaaattcgctcagctgaagaattaaagattccgggagcctcg
aagatcaaaaaggaagaaatggatatggctttacagcttatcaaacaacacagccatagc
tttgatatctccggatataaaaatgaatatacccgtgatctgctcaagatcatcaaacag
aaagaaaaaggcaaacgggcaactatccgaaagatgacagtagaaaatacaaaagcagca
gatctgctagcgcagctaaaggcaagtttagcttaa

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