Sphingobacterium spiritivorum: I6J01_08850
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Entry
I6J01_08850 CDS
T07566
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I6J01_08850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_08850
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I6J01_08850
BRITE hierarchy
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GFIT
Motif
Pfam:
Ku
DUF5780
Motif
Other DBs
NCBI-ProteinID:
QQT37493
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All DBs
Position
complement(2127752..2128507)
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AA seq
251 aa
AA seq
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MRAIWTGAIGFGLVNIPVKIYSATQSSSLDLDMLDRKDKSNIKYKRVNEKTGKEVAWENI
VKGYMLKDKYVVLEDADFEDASPEKNKMINLRSFVKLEEIDSIYFDTPYYLEPQKGGEKA
YQLLLKGLEKSKTAGLGSFVMRNIENLVIIKPYQNMLLLNKLRFEEEIRSAEELKIPGAS
KIKKEEMDMALQLIKQHSHSFDISGYKNEYTRDLLKIIKQKEKGKRATIRKMTVENTKAA
DLLAQLKASLA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaatttggacaggagcaataggttttggacttgttaatatcccggttaaaata
tacagtgccacacaaagcagttcactggatctggacatgctggatcggaaagataaatca
aatatcaagtacaaaagggtgaatgagaagacaggtaaagaagtcgcatgggaaaatatt
gtcaaaggatatatgctgaaagacaaatatgtcgtactggaggatgcggactttgaagat
gcaagtcctgaaaaaaataaaatgatcaatctccggtcctttgtcaaacttgaagaaata
gatagtatttattttgatactccctattatttagagcctcagaaaggtggagagaaagcc
taccagttactcttaaaaggattagaaaaaagcaaaactgcaggcttaggatcctttgtt
atgcgcaatattgaaaatctggtcattataaaaccctaccagaatatgcttttactaaat
aagctccgttttgaagaagaaattcgctcagctgaagaattaaagattccgggagcctcg
aagatcaaaaaggaagaaatggatatggctttacagcttatcaaacaacacagccatagc
tttgatatctccggatataaaaatgaatatacccgtgatctgctcaagatcatcaaacag
aaagaaaaaggcaaacgggcaactatccgaaagatgacagtagaaaatacaaaagcagca
gatctgctagcgcagctaaaggcaagtttagcttaa
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