Sphingobacterium spiritivorum: I6J01_19250
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Entry
I6J01_19250 CDS
T07566
Symbol
rnhA
Name
(GenBank) ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J01_19250 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspi03032
]
I6J01_19250 (rnhA)
Enzymes [BR:
sspi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
I6J01_19250 (rnhA)
DNA replication proteins [BR:
sspi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
I6J01_19250 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
I6J01_19250 (rnhA)
Elongation factors (archaeal)
I6J01_19250 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QQT35388
LinkDB
All DBs
Position
complement(4586571..4587071)
Genome browser
AA seq
166 aa
AA seq
DB search
MIELYTDGASSGNPGPGGYGTILRTRYSGENEAFKGKLIEKTFSEGFRRTTNNRMELMAV
IIGLEALKSPQQQVTIYSDSKYVIDAIDKKWVYGWIQKGFQGKKNKDLWIRLMKSYKLHQ
VRLVWVKGHAGHPDNERCDQLAVAASKDKANWKIDAVFEQEEKALG
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattatatacggacggagcttccagcggtaatccgggacccggaggttacgga
actattctaagaactcgttatagcggtgaaaatgaggctttcaaaggtaagctgatagag
aaaaccttttcggaagggtttcgcagaactacaaataaccgcatggagctcatggctgtc
attatcggactggaagccttgaaaagtccgcaacagcaagtgactatttactcagattca
aaatacgttatcgatgccattgataaaaaatgggtttacggatggattcagaaaggtttt
cagggtaaaaagaataaagatctgtggatacgtctgatgaaaagttataagttacatcag
gtgcgtctggtctgggtaaaaggacacgccgggcatccggataatgagcgttgtgatcaa
ctggcggtagctgcatcaaaagataaagcgaactggaagattgacgctgtctttgagcag
gaagaaaaagctctggggtaa
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