Streptococcus salivarius CCHSS3: SALIVB_1890
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Entry
SALIVB_1890 CDS
T01580
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssr
Streptococcus salivarius CCHSS3
Pathway
ssr03030
DNA replication
ssr03410
Base excision repair
ssr03420
Nucleotide excision repair
ssr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SALIVB_1890 (polA)
03410 Base excision repair
SALIVB_1890 (polA)
03420 Nucleotide excision repair
SALIVB_1890 (polA)
03440 Homologous recombination
SALIVB_1890 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssr03032
]
SALIVB_1890 (polA)
03400 DNA repair and recombination proteins [BR:
ssr03400
]
SALIVB_1890 (polA)
Enzymes [BR:
ssr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SALIVB_1890 (polA)
DNA replication proteins [BR:
ssr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SALIVB_1890 (polA)
DNA repair and recombination proteins [BR:
ssr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SALIVB_1890 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SALIVB_1890 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CCB94143
LinkDB
All DBs
Position
complement(1970326..1972965)
Genome browser
AA seq
879 aa
AA seq
DB search
MTNQKKLLLIDGSSVAFRAFFALYNQIDRFRNNNGLHTNAIYGFHLMLDNLLERIQPTHV
LVAFDAGKTTFRTEMFADYKAGRAKTPEEFREQFPYIREMLAARGIAYYDLAQYEADDII
GTLAKMAENTSEDYQITVVSGDKDLIQLTDDNTVVEISKKGVAEFEAFTPDYLMEKMGIT
PAQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLLEHGSLEGIYDHIDEMKKSKMKENLIN
DKEQAFLSKTLATIDTQSPIEIGLDDTAFTGPDLEKLAAFYDEMGFVQFKNALGGEAVPK
DFDVAYTEPSQVTEDHFSPDDFFYFEILDDNYHTEPIIGFAWGNDKQIYASTDTNLLKSD
AFQTALSKAVNIYDFKRSKVLLSHLGIDLPTANFDARLAKYLLSTVEDNELSTIARLYTD
LPLETDEVVYGKGAKRAVPEKEVLLSHLAKKVKVLQVARPVMLEKLAEHGQSELLFDMEL
PLANVLAKMEIAGIKVKGQTLNEMAVENQVVIDKLTQEIYEMAGEEFNINSPKQLGVILF
EKMGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVAKILEYRQITKLQSTYVLGLQDYILE
DGKIHTRYVQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPSTEDAVLLSSDYSQIE
LRVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDVTPNDRRNAKAVNFGIVYGIS
DFGLSNNLGISRKKAKEYIDTYFERYPGIKAYMDNVVREAKDKGYVETLFHRRRELPDIN
SRNFNVRNFAERTAINSPIQGSAADILKIAMINLDKALVEGGYKTKMLLQVHDEIVLEVP
NDELVAMKTLVKETMEAAVELAVPLIADENDGRTWYEAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcagaaaaaattactcctaattgacggttcatccgttgcctttcgtgccttt
ttcgcactttataatcaaattgaccgttttcgtaacaataacggccttcataccaatgct
atctacggtttccacctcatgttggacaacctgcttgagcgtatccaaccgactcatgtt
ttggtagcctttgatgcgggtaaaacaactttccgtacagagatgtttgcggactataag
gctggtcgtgccaagactccagaggaattccgtgagcagttcccttatatccgtgagatg
ttggctgcacgtggcattgcctattacgacttggctcagtacgaggcagatgacattatc
ggtaccttagctaagatggctgaaaataccagtgaggactaccaaatcacagttgtttct
ggggacaaggacttgattcagctgactgatgataatacagtggttgaaatttcgaagaaa
ggtgtagctgagttcgaggccttcactcctgactacctcatggagaaaatggggattact
ccggcgcaattcatcgacctcaaggccctcatgggtgataagtccgataatattccaggg
gttactaagattggtgaaaagactggtctcaagctcctcttggaacacggttcccttgaa
ggtatctatgatcacatcgacgagatgaagaagtccaaaatgaaggaaaatctcatcaat
gacaaggaacaagccttcctttctaagaccctggcgactattgatacccagtctcctatt
gaaattggtctcgatgatacggcctttacggggcctgaccttgaaaaattggcagccttt
tatgacgagatgggctttgttcagtttaaaaatgcccttggtggcgaggctgtgccaaaa
gattttgatgtggcctatactgagccaagccaagtgacagaagatcacttcagccctgac
gatttcttttattttgaaatccttgatgacaattatcacactgagcctatcatcggtttt
gcatggggtaatgataagcagatttatgcgtctacagatactaatctactcaaatcagat
gccttccaaacagctctttctaaagctgttaatatctacgacttcaagcgtagtaaggtt
cttttgagccacctaggtattgacttgccgacggctaattttgatgcccgtctggccaag
tatctcctctcaaccgttgaggacaatgaattgtcaaccattgcccgtctctatacagac
ttgccgcttgaaacagatgaagtggtctatggtaaaggggctaaacgtgccgttcctgaa
aaagaggtcttgctcagccacctggctaaaaaagtcaaggtccttcaagtagctagacct
gtcatgcttgaaaaattggctgaacacggccaatcagagcttctctttgatatggaatta
ccactggcaaatgtgctagctaagatggaaatcgctggtattaaggttaagggacaaacc
cttaacgagatggcagtggaaaaccaagtggttattgataaattaacccaagaaatatac
gaaatggctggtgaggagttcaatattaactcgcctaaacagttgggtgtcatcctcttc
gaaaagatgggactacctttggaatacactaagaaaaccaagacaggttattcaacggct
gtggatgtccttgaacgtttggcaccaattgctccaatcgtagctaagattttggagtac
cgccaaatcactaagcttcagtctacctatgtcttggggcttcaggattatatccttgag
gatggcaagatccatacacgttatgtgcaagatctaactcagacaggtcgcctctcatca
gtggatccaaacttgcaaaatatccctgttcgcttggagcaaggccgtctcatccgtaag
gcttttgtcccatcgactgaggacgcagtgcttttaagctcggattattcacagattgag
ttgcgcgtgttggctcacatttcgggagatgagcatttgattgctgcttttaaagaaggg
gcagatatccatacctctacagccatgcgtgtttttggtattgaaaagccagaggatgtc
acacctaacgaccgtcgtaacgccaaggctgttaacttcggtatcgtttatggcatttct
gacttcggcctttctaacaaccttggcattagccgtaagaaggccaaggagtatatcgac
acctactttgaacgttatcctggtatcaaggcctatatggataatgtggttcgtgaagcc
aaggataagggctacgtagaaactctcttccaccgccgtcgtgagttgccagatatcaat
tctcgtaactttaatgttcgcaacttcgcagagcgtacagctatcaactcgcctatccag
ggaagtgccgctgatatcctcaagattgctatgattaacttagacaaggctttggtagaa
ggtggctataaaactaagatgctcctccaagtgcacgatgaaatcgtccttgaggtgcca
aacgatgaacttgtagcgatgaaaaccttggttaaagagaccatggaagctgcagttgaa
ctcgctgtcccactcattgcagatgagaatgacggccgtacatggtatgaggcaaagtaa
DBGET
integrated database retrieval system
