KEGG   Shinella sumterensis: Q9314_08465
Entry
Q9314_08465       CDS       T09417                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ssum  Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:ssum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssum03400]
    Q9314_08465
Enzymes [BR:ssum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Q9314_08465
    5.6.2.6  RNA 3'-5' helicase
     Q9314_08465
DNA repair and recombination proteins [BR:ssum03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Q9314_08465
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: WLS09780
UniProt: A0AA50DB04
LinkDB
Position
1662610..1665135
AA seq 841 aa
MNSIDSAAVPFLLPKPFSAWFAGKGWQPRAHQMELLARATAGESLLLIAPTGAGKTLAGF
LPALTDLTRRGKIPPGSAFTGIHTLYISPLKALAVDIERNLMKPVSEMGLPISIETRTGD
TPQAKRQRQRLNPPDILLTTPEQVALLIANGEAARFFKDLKYVIFDELHSLVTSKRGHLL
SLGLARLRRLAPGLRTIGLSATVAEPMDLRRWLVAQSAGEDNHAGLVTAPGGARPIITIL
KSEERVPWSGHQAKYAMPEVYEAIKQHKTALLFVNTRSQAEILFQELWNINEDTLPIALH
HGSLDVGQRRKVEQAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGR
ANHRMDEPSRAILVPANRFEVMECQAALDANYIGAQDTPPVGDGALDVLAQHVLGMACAA
PFDEDDLFAEVTSASPYTGLPREKFGRIVQFVATGGYALKTYERYARIRRTPDGLWRVSN
PGVAQQYRLNLGTIVEMPMLNVRMVKRGAKGAVGRGGASLGKVEEYFLEMLSPGDTFLFS
GKVLRFEGIRENECLVSQAFALDPKVPAYAGGKFPLSTYLADQVRGMLDDPARWGALPDQ
VRDWLALQRDVSSLPRRDELLIETFPRGSRHYMVAYPFEGRLAHQTLGMLLTRRLERAGR
RPLGFVATDYSLAIWALDDLGHAFAVERPSLSALFDEDMLGDDLEAWLDESYMLKRTFRN
CAVIAGLIEQRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEATRNDAAAGLLDIQRL
GDMLARIKGHITHRQLTRISPLAVPIMLEIGRETVAGEAQDSLLAEAADDLIAEAMGEPE
R
NT seq 2526 nt   +upstreamnt  +downstreamnt
gtgaacagcatcgattctgccgccgtcccctttcttttgccgaagcccttctctgcatgg
ttcgcaggcaagggctggcagccgcgcgcccatcagatggagcttctcgcgcgcgccacg
gcgggcgagagcctgctgctcatcgcgcccaccggtgcgggcaagacgctggccggcttc
ctgccggcgctgaccgacctgacgcgacgcggcaagatcccgccgggctcggcctttacc
ggcatccatacgctttacatctcacccctgaaggcgctggccgtcgacatcgagcgcaac
ctgatgaagcccgtctcggagatgggcctgcccatctccatcgagacgcgcaccggcgac
acgccgcaggccaagcgccagcgccagcggctgaacccgcccgatatccttctgaccacg
cccgaacaggtggcgctgctcatcgccaacggcgaggcggcgcgtttcttcaaggacctg
aaatacgtcatcttcgacgagcttcactcgctcgtcacctccaagcgcggccatctgctg
tcgctcggccttgcgcgcctgcgccgccttgcgcccggtctcaggaccatcggcctctcc
gcgacggtggccgagccgatggacctgcgccgctggctggtcgcgcaatcggccggtgaa
gacaaccatgccggtctcgtcaccgcgcccggcggcgcaaggcccatcatcaccatcctg
aaaagcgaggagcgcgtgccctggtccggccatcaggcgaaatacgccatgccggaggtc
tatgaggcgatcaagcagcacaagacggcgctgctcttcgtcaacacgcgcagccaggcg
gaaatcctcttccaggaactctggaacatcaacgaggataccttgccgatcgcgctgcac
cacggctcgctcgatgtcggccagcgccgcaaggtcgagcaggccatggcggaaaaccgg
ctgcgcgccgtcgtcgccacctcgacgctcgatctcggcatcgactggggcgatgtcgat
ctcgtcattcacgtcggtgcgccgaagggcgcctcgcggctcgcccagcgcatcggccgc
gccaaccaccgcatggacgagccgagccgcgccatcctggtgcccgccaaccgcttcgag
gtcatggagtgccaggccgcgctcgacgccaactatatcggcgcgcaggatacgccgccc
gtcggcgacggcgcgctcgacgtgctcgcccagcatgtgctcggcatggcctgcgcagca
cccttcgacgaggacgacctcttcgccgaagtcacctccgcctcgccctataccggcctg
ccgcgcgaaaaattcggccgcatcgtgcagttcgtcgcgaccggcggctatgcgctgaag
acctatgagcgctatgcccgcatccgcaggacgccggacggcctctggcgcgtctccaat
cccggcgtcgcgcagcaataccggctcaatctcggcaccatcgtggaaatgcccatgctc
aatgtgcgcatggtcaagcgcggcgcgaagggtgcggtcgggcgcggcggcgcgtcgctc
ggcaaggtggaggaatatttcctcgaaatgctctcgcccggcgataccttcctgttctcc
ggcaaggtgctgcgtttcgagggcatccgcgagaacgaatgcctcgtcagccaggccttc
gcgctcgacccgaaggtgccggcctatgccggcggcaagttcccgctctccacctatctc
gccgatcaggtgcgcggcatgctggacgatcccgcgcgctggggtgcgctgcccgaccag
gtgcgcgactggctcgccttgcagcgcgacgtctcgtccctgcccaggcgcgacgagctc
ctgatcgagacctttccgcgcggcagccggcattacatggtggcctatcctttcgaaggg
cggcttgcccaccagacgctcggcatgctgctgacgcgccggctggagcgcgccggccgc
cggccgctcggcttcgtcgccaccgactattcgctcgccatctgggcgctggacgatctc
ggccatgcctttgccgtcgagcgcccgtcgctgtcggcactcttcgacgaggacatgctg
ggcgacgatctggaggcctggctcgacgaaagctacatgctcaagcgcaccttccgcaat
tgtgccgtgattgccggcttgatcgagcagcgccatccgggcaaggaaaagaccgggcgg
caggtcaccgtttccgccgacctcatctacgacgtgctgcgcagccacgagccggaccac
atcctgctcgaggcgacacgcaacgatgcggcggcggggcttttggatattcagcgattg
ggcgatatgctggcccgaatcaaagggcacatcacccaccggcaactgacccgcatctcg
ccgctcgccgtgccgatcatgctggagatcggcagggaaacggtggcgggcgaggcgcag
gattcgctgctggcggaagccgcggacgacctgatcgccgaagcgatgggcgagccggag
cgttag

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