Shinella sumterensis: Q9314_16000
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Entry
Q9314_16000 CDS
T09417
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssum03000
]
Q9314_16000
Transcription factors [BR:
ssum03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Q9314_16000
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WLS07666
UniProt:
A0AA50D3D4
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All DBs
Position
complement(3210805..3211692)
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AA seq
295 aa
AA seq
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MSRSLPLNALRVFEAAARHGNFTRAGDELGMTQTAVSYQIKLLEEMLGVTLFLRQPRQVV
LSEAGERLRPKVAEGLAKLAEAVGDLRGASEQKLHIHSTPTFALQWLSRSIGDFQLKHPS
IAVRLSTSQDVIDFAKEEADVAIRWGKGDWPGLECHRVMRMNFTPMLSPALAETIGGVKT
PSDLLKLPIVSARDVWWRSWFSAAGIDDPGLERFPPNELGTQTIDAQVAIAGQGVAILNP
GHFRSEIAAGQLFQPFELTCNDGRDYWLAYPLNRRNVAKIRAFRDWILATMPAEA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggtcactcccgctcaacgcgctgcgcgtcttcgaagccgccgcgcgccacggc
aatttcacccgcgccggcgacgagctcggcatgacccagacggcggtcagctaccagatc
aagcttctggaggagatgcttggcgtgacgcttttcctgcgccagccccgccaggtcgtg
ctgagcgaagcgggcgagcgtctgcggcccaaggtggcggaaggtctcgccaagctcgcc
gaggcggtcggggacctgcgcggcgcgagcgagcaaaaactgcacatacactcgacgccc
acttttgcgctgcaatggctaagccgttccatcggcgatttccaactgaagcatccgagc
atcgccgtgcgcctctccacctcgcaagacgtgatcgacttcgccaaggaagaggcggat
gtggcgatccgctgggggaaaggcgactggcccggcctcgaatgccaccgcgtgatgcgc
atgaacttcacgcccatgctcagcccggcgctggccgagacgatcggcggcgtgaaaacc
ccctcggacctgctgaaactgccgatcgtcagcgcgcgagacgtctggtggcgcagctgg
ttttccgccgctggcatcgacgatcccggcctcgaacgcttcccgccaaacgaacttggc
acgcagaccatcgatgcgcaggtggcgatcgccggccagggcgtcgccatcctcaatccc
ggccatttccgctccgagatcgccgccggacagctcttccagccattcgagcttacctgc
aacgatggtcgggattactggctggcctatccgttgaaccgccgtaacgtcgcgaaaata
cgtgcttttcgcgactggatcctcgcgacgatgccagcggaggcgtag
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