Serratia surfactantfaciens: ATE40_008735
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Entry
ATE40_008735 CDS
T06779
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssur03000
]
ATE40_008735
Transcription factors [BR:
ssur03000
]
Prokaryotic type
Helix-turn-helix
Other families
ATE40_008735
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_2
Mg_chelatase
HTH_30
HTH_29
AAA_5
HTH_7
Xre-like-HTH
AAA
HTH_23
HTH_1
IclR
HTH_22
HTH_28
AAA_16
HTH_psq
HTH_50
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AOE99328
LinkDB
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Position
1818166..1819950
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AA seq
594 aa
AA seq
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MLPDDRLPAEGASLLTQPLAESWQRSQGYGLTRTDQHIPFIKAGLLEELRSRNDWVPQRV
QPLIEQLGAKITRQPAIVVIADADGLVLETCGNTDFLHKASRFALAPGNQWGEAERGTNA
IGTALALGAFCEVRGDQHFLNQNAGLNCTAAPIYRPDGRIAGILDLSAPAQRPYPDAQRL
IMQAVRHIEHRWVRSAIADRHWTLRLHADAGRLGSAQELLLVFHDEVLVAANRLAMMEFQ
LSPAAFGSLEFAQLFPELLRQPAGAPRQTLAGNQRHYYSLLEAPQRRVSALRSVPPEERA
DEQHQKALRILNAGLALCVTGETGCGKEHFSRRLFQESRWRNGNFVAINCAALPEPLIES
ELFGYAPGAFTGANPKGYIGKIREADGGVLFLDEIGDMPAGLQTRLLRVLQEKTVTPLGS
RSAYPVDFALVCATHHDLHRLVQAGAFREDLLYRIQEYSLRIPPLRERAQLETFILQLWR
ELGGERRGIRLLPEALAMLARYPWPGNVRQLLSTLKVLLALADDHAVLSLDDLPQSIAVL
APQRVDADAGLGDLQAAIDKANGNLSRAAKALGVSRSTLYRKLGRQKALGNETA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctgacgaccgcttgcccgcagagggcgccagcttgctgacccagccgttggcg
gaatcctggcaacgcagccagggttatggcttgacgcgcaccgatcaacatatcccgttt
atcaaagccggattgcttgaagagctgcgcagccgcaacgattgggtaccgcagcgggtg
cagccgctgatcgagcagctgggtgcgaaaattacgcgccaacccgccatcgtagtgatc
gccgacgccgacgggctggtgctggaaacctgcggtaataccgactttctacacaaagcg
tcgcgctttgcgctggcgccgggcaaccagtggggagaagcggagcggggcaccaacgcc
atcggtaccgcgctggcgctgggcgctttctgcgaagtgcgcggcgaccagcattttctc
aaccaaaatgccgggttgaactgcaccgccgcgccgatctatcggccggatggccgcatt
gccggcatactggatctctccgcgcccgcccagcgtccgtatcctgacgcgcagcgcctg
atcatgcaggcggtgcggcatatcgaacaccgttgggtcagaagcgcgatcgccgatcgc
cactggacgctgcgcctgcacgccgatgccggtcgcctgggcagcgcgcaggagctgttg
ctggtattccacgacgaagtgctggtcgccgccaatcggttggcgatgatggagtttcaa
ctctcgccggcggcctttggctcgcttgagttcgcccagctgttccccgagctgttacgg
cagcccgccggcgcgccgcgtcagacgctggccggcaatcaacggcattattattcgctg
ctcgaggcgccgcagcgccgcgtcagcgccctgcgttcggtgccgccggaggaaagagcc
gacgaacaacatcagaaggcgttgcgcattctcaacgccggcctcgccttgtgcgtgacc
ggcgaaaccggctgcggcaaagagcacttcagccgccgcctgttccaggagagccgctgg
cgcaacggcaactttgtggcgatcaactgcgcggcgctgcctgaaccgctgatcgagtcc
gagctgtttggctatgcgccgggggcgtttaccggcgccaaccctaaaggttatatcggc
aagatccgcgaggcggacggcggcgtgctgttcctggatgagatcggcgacatgccggcg
ggcctgcaaacgcgcctgctgcgggtactgcaggaaaaaaccgtcacgccgctaggcagc
cgcagcgcttatccggtcgatttcgcgctggtctgcgccacccaccacgatctgcaccgg
ctggtgcaggcaggggcgtttcgcgaggatttgctgtatcgcatccaggaatacagcctg
cgcatcccgccgctcagagagcgagcgcaattggagaccttcattctgcagctgtggcga
gagctgggcggcgagcggcgcggcattcggctgttgccggaggcgctggcgatgctggcg
cgctatccgtggccgggcaacgtgcggcaattgctgagtacgctcaaagtgctgctggcg
ctggcggacgatcacgcagtgctgagcctggacgatctgccgcagtccatcgcggtgttg
gcgccacagcgggtggacgccgacgccggccttggggatctgcaggcggcgatcgacaag
gcgaatggcaacctcagccgggcggcgaaagcgctcggcgtttcgcgcagcacgttgtat
cgcaagctggggaggcagaaagcgctggggaatgaaacggcatga
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