Serratia surfactantfaciens: ATE40_015465
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Entry
ATE40_015465 CDS
T06779
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATE40_015465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssur03400
]
ATE40_015465
DNA repair and recombination proteins [BR:
ssur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ATE40_015465
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ATE40_015465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AOF00585
LinkDB
All DBs
Position
complement(3288453..3289184)
Genome browser
AA seq
243 aa
AA seq
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MDGWERAFVLHGRPYSETSLMLDLFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRW
GGRGEVKTLRNAEAVSLGLPLSGMMLYSGLYVNELLARVLEQEANYSVLFFDYLQCLQAL
AAEDSSPEQALRQFELALLHHLGYGLDFLHCAGSGLPVDDAMTYRYREEKGFIASLVVDH
YSFTGRELRALAERQFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFVRKQPNTPV
DDA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtggacggctgggagcgcgctttcgtcctgcatgggcggccgtacagtgaaaccagtctg
atgctggatctgtttaccgaaggtcatgggcgggtgcgcttgctggcgaaaggcgcgcgc
agccgccgctccaatctgaagggctgtctgcagccctttacccctctgttagtgcgctgg
ggcggccgcggcgaagtgaaaacgctgcgcaacgccgaagcggtctctctcggtttaccc
ctcagcggcatgatgctctacagcggcctgtatgtgaacgaactgctggcgcgggtgctg
gagcaggaagccaactactcggtgctgttcttcgactatctgcaatgcctgcaggcgctg
gcggcggaagacagttcgccggagcaggcgctgcgccagttcgagctggccttgttgcat
cacctcggctacggcctcgattttctgcactgcgccggcagcggcctgccggtggatgac
gccatgacctaccgttaccgcgaagagaaaggctttatcgccagcctggtggtggatcat
tacagcttcaccggccgcgaactgcgtgcgctggcggagcgtcagtttcccgatgccgac
acgctgcgcgccgccaagcgtttcacccgcatggcgctgaaaccctacctcggcggcaag
ccgttgaagagccgcgaactgttccgccagttcgtgcgcaaacagccgaatacgccggtc
gacgacgcctga
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