Streptomyces sp. SirexAA-E: SACTE_0879
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Entry
SACTE_0879 CDS
T01601
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ssx
Streptomyces sp. SirexAA-E
Pathway
ssx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SACTE_0879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssx03400
]
SACTE_0879
Enzymes [BR:
ssx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SACTE_0879
DNA repair and recombination proteins [BR:
ssx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SACTE_0879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DUF1344
CaATP_NAI
PIN_10
C1_1
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AEN08808
UniProt:
G2N9C3
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All DBs
Position
complement(1005476..1007620)
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AA seq
714 aa
AA seq
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MSSDNERSEEPDAGAPEQLALIRETVRRAKVPRAKPRTWRGAALAEELPVARVLVNKGAL
HLDQYFDYAVPEELDADAQPGVRVRVRFGAGGRQVRGGRREGGGLIDGFLVERRASSDYQ
GALAALAYVVSPEPVLGPELLALCRAVADRYAGSLADVLQLAVPPRNGRAESKASPAPLP
PPPVPSPGTWERYTQGPGFLRALAEGGAPRAVWTALPGPHWPEEIARAVAATLASGRGAL
VVVPDGRAAGRVDAALTALLGKGHHALLTADSGPEKRYGQWLAVRRGSVRAVVGTRAAMF
APVADPGLVAVWDDGDSSHSDDNAPFPHVREVLELRAAHGRCGFLLGGINCTVEAAQLVE
SGWALPLRAERERLRSAAPLVRTVDDGELARDGAARSARLPSLAWQTVRDGLRGGPVLVQ
VPRRGYAPRLACERCREPARCRHCAGPLQATDRQDLDCAWCGRAETAWRCGACGGVRLRA
QIVGARRTAEELGRAFPAVPVRTSGRDHVLDSVPDQPALVVSTPGAEPVAEGGYAAALLL
DGWAMVGRPDLRAGEEALRRWTAAAALVRGRSEGGTVVVVAEPTLRPVQALVRWDPVGHA
RRELAERAELGFPPVSRMASVTGPPEALAAFLATAELPAQAEVLGPVPVPATAAGRPRRP
GDAPPGEVWERALIRVPPGRGAALAHALKAASAARTARGSGDPVRIRIDPPDIG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgacaacgagcggtccgaggagcccgacgccggggcaccggagcagcttgcg
ctgatccgggagaccgtacgccgggccaaggtgccccgcgcgaagccccggacctggcgg
ggcgccgcgctcgccgaggagctgcccgtcgcccgcgtcctggtcaacaagggcgcgctc
cacctcgaccagtacttcgactacgccgtccccgaggagctcgacgccgacgcacagccc
ggcgtccgcgtccgggtgcggttcggcgccggcgggcggcaggtgcgcggcggacggcgc
gagggcggcgggctcatcgacgggttcctcgtcgagcggcgcgcctcctccgactaccag
ggcgccctcgcggccctggcctacgtcgtctcgcccgagccggtgctcgggcccgagctg
ctcgccctctgccgtgccgtcgccgaccgctacgcgggcagcctcgccgacgtgctccag
ctcgccgtgcccccgaggaacggcagggccgagtccaaggcctcgcccgcgcccctgccg
ccgccgcccgtcccctcgcccgggacctgggagcggtacacccagggacccggcttcctg
cgggcgctggccgagggcggggcgccccgggccgtgtggaccgcgctgcccggcccgcac
tggcccgaggagatcgcccgggccgtcgccgcgaccctggcgtcgggcaggggcgcgctc
gtcgtcgtaccggacggccgggcggcggggcgggtggacgcggcgctcaccgcgctgctg
ggcaaggggcaccacgcgctgctcaccgccgactccgggcccgagaagcggtacgggcag
tggctcgcggtccggcgcgggtccgtgcgcgcggtggtcgggacccgggccgcgatgttc
gcccccgtggccgatccgggactggtggccgtctgggacgacggcgactccagccacagc
gacgacaacgcccccttcccgcacgtccgggaggtactggagctgcgggcggcgcacggc
cggtgcggattcctgctgggcgggatcaactgcacggtggaggccgcccagttggtcgag
agcggctgggcgctgccgctgcgtgcggaacgggagcggctgcggtcagcagcacccctc
gtgcgtacggtcgacgacggcgagctggcgcgcgacggggcggcgcgttcggcgcggctg
cccagcctggcctggcagaccgtccgggacgggctgcgcggcggcccggtgctcgtccag
gtgccgcgccgcggttacgcgccccggctggcctgcgagcgctgccgcgaacccgcgcgg
tgccggcactgcgcgggccccttgcaggccaccgaccggcaggacctcgactgcgcgtgg
tgcgggagggccgagacggcctggcggtgcggagcctgcggtggcgtgcggctgcgggcg
cagatcgtcggcgcccgcaggaccgcggaggagctggggcgggcgttcccggccgttccc
gtgcggacgtcgggccgcgaccatgtgctcgattccgtaccggaccagcccgcgctggtc
gtcagcacacccggggccgagccggtggccgaagggggctacgcggctgcgctgctgctg
gacggctgggcgatggtgggccgccccgacctgcgggcgggggaggaggcgctgcggcgc
tggacggcggcggccgccctggtgcgcggccggtccgagggaggcacggtggtggtcgtc
gccgagccgaccctgcggcccgtgcaggcgctggtgcgctgggacccggtgggccacgcc
cgccgtgagctcgccgaacgggccgagctcggcttcccgccggtgtcacggatggcgtcg
gtgacgggcccgcccgaagcgctcgccgcgttcctggccacggcggagctgccggcacag
gccgaggtcctcgggcccgtaccggtgcccgcgacggcggccgggcggccccgcaggccg
ggggacgccccgccgggcgaggtctgggagcgggcactgatcagggtgccgccggggcgc
ggagcggcgctcgcgcacgcgttgaaggctgcgtcggcggcgcgtacggcccgggggagc
ggcgacccggtgcggatcaggatcgatccgccggacatcggctga
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