Sphingobium sp. SYK-6: SLG_04050
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Entry
SLG_04050 CDS
T01622
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssy03021
]
SLG_04050 (rpoH)
Transcription machinery [BR:
ssy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLG_04050 (rpoH)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
ARA70
Motif
Other DBs
NCBI-ProteinID:
BAK65080
NITE:
SLG_04050
UniProt:
G2IKL7
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Position
413815..414717
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AA seq
300 aa
AA seq
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MSNGSNVPATIPALGSDASLNRYLAEIRKFPVLKPEEEYMLAKRYQEHGDPEAAARLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEF
ILRSWSLVKIGTTAAQKKLFFNLRRMKNQIEAFEDGDLRPEDVTKIATDLGVSEDDVISM
NRRMAMGGDTSLNVSMNEDGEGQWQDWLADERPLQDERIADAQESNVRHDMLLAAMDDLN
DRERHILQERRLAEEPKTLEELSQVYGVSRERVRQIEVRAFEKLQRAMMRIAGEKRLIPA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatggcagcaatgtccccgcgacaattccggcgcttggcagcgatgccagcctg
aaccgctatctggcggagatccggaagttcccggtgctcaagcccgaggaagaatatatg
ctcgccaagcgctaccaggagcatggcgatccggaagccgccgcccggctggtgaccagc
catctgcgcctcgtggcgaagatcgcgatgggctatcgcggctatggactgccggtcagc
gagctgatctcggaaggcaatatcggcctcatgcagggcgtgaagaaattcgagccggac
cggggcttccgcctcgcgacctatgcgatgtggtggatccgcgcctccatacaggaattc
atcctgcgctcgtggagcctcgtcaagatcggcacgacggccgcgcagaagaagctcttc
ttcaacctgcgccgcatgaagaaccagatcgaagcgttcgaggacggcgacctgcgcccc
gaggacgtgaccaagatcgcgaccgacctcggcgtgtccgaggacgatgtcatctcgatg
aaccgccgcatggcgatgggcggcgacacctcgctcaacgtctcgatgaacgaggatggc
gagggccagtggcaggactggctggccgacgagcgtccgctgcaggacgagcgcatcgcg
gacgcgcaggaaagcaatgtgcgtcatgacatgctgctggcggccatggacgacctcaac
gatcgcgaacggcacatcctgcaggagcgtcgcctcgcggaggagcccaagacgcttgag
gagctctcgcaggtctatggcgtctcgcgcgagcgggtccgccagatcgaggtgcgcgcc
ttcgagaagctgcagcgcgcgatgatgcgcattgccggcgagaagcgtctcattcccgcc
tga
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