Sphingobium sp. SYK-6: SLG_23930
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Entry
SLG_23930 CDS
T01622
Symbol
trmFO
Name
(GenBank) methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
KO
K04094
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:
2.1.1.74
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssy03016
]
SLG_23930 (trmFO)
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_23930 (trmFO)
Enzymes [BR:
ssy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.74 methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
SLG_23930 (trmFO)
Transfer RNA biogenesis [BR:
ssy03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SLG_23930 (trmFO)
Chromosome and associated proteins [BR:
ssy03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SLG_23930 (trmFO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
NAD_binding_8
DAO
Pyr_redox_2
FAD_binding_3
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
Pyr_redox
3HCDH_N
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
BAK67068
NITE:
SLG_23930
UniProt:
G2IIE5
LinkDB
All DBs
Position
2573859..2575217
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AA seq
452 aa
AA seq
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MTHQVHIIGGGLAGSEAAWQLAQAGVRVRLSEMRGAGDMTPAHQTDALAEMVCSNSFRSD
DADSNAVGLLHQEMRALGSLVMAKADAAKVPAGSALAVDRDRFAQGVTQAIMDHPLIELV
RERVDGLPAEGLTIVATGPLTAPSLADAIAGATGRDQLAFFDAIAPIVHADSIDMSIAWK
ASRWDKGSPDGDGKDYINCPMDKARYDAFVAGLLAGPKTEFRQWEKDTPYFEGCMPIEVM
AERGPETLRHGPMKPVGLDNPRTGRWPHAVVQLRQDNALGTLWNMVGFQTKLKYEAQVEL
FRTIPGLENAQFARLGGLHRNTFIRSPELLDGQLRLRAAPHIRFAGQITGCEGYVESAAV
GLLAGLMTAAQIAGETLAVPPAETALGALLGHITGGADAGSYQPMNVNFGLFPPLADDIR
KKDRKRGYTDRAREALAAWQTQALRNRVAVSA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatcaggttcacatcatcggcggcggcctcgcgggcagcgaagcggcatggcag
ctcgcgcaggcgggcgtgcgggtccgcctttccgaaatgcgcggcgcgggcgacatgacg
ccggctcaccagaccgacgcgctggccgagatggtctgctccaacagcttccgctcggac
gatgccgacagcaatgccgtggggctgctccatcaggagatgcgcgcgctcggatcgctg
gtgatggcgaaggccgacgcggcgaaagtgccggccggctccgcgctggcggtggaccga
gaccggttcgcgcagggcgtgacgcaggcgatcatggatcatccgctgatcgaactggtg
cgcgagcgcgtggacggcctgccggcggaagggctgaccatcgtcgcgaccggtcccctc
accgccccctcgctggcggacgcgatcgccggggccaccggccgcgaccagctcgccttc
ttcgacgccatcgcgcccatcgtccatgccgacagcatcgacatgtcgatcgcatggaag
gccagccgctgggacaagggctctcccgatggggacggcaaggattacatcaattgcccg
atggacaaggcgcgctatgacgcgttcgtcgcgggactgctggcggggccgaaaacggaa
ttccgccagtgggaaaaggatacgccctatttcgagggctgcatgcccatcgaggtgatg
gccgagcgcgggccggagacgctgcgccacgggcccatgaagcccgttggcctcgacaat
ccgcgcaccggacgctggccccatgccgtcgtccagctgcggcaggacaatgcgctgggc
acgctgtggaacatggtcggcttccagaccaagctcaaatatgaagcgcaggtggagttg
ttccggaccatccccggcctcgagaatgcgcagttcgcgcggttgggcgggctgcaccgc
aacaccttcatccgcagccccgagctgctcgacggccagttgcgcctgcgcgccgcgccg
cacatccgcttcgccgggcagatcaccggctgcgagggctatgtcgaaagcgcggccgtc
ggcctgctcgccggcctcatgaccgcagcgcagatcgccggggaaacgctggccgtgccg
cctgccgaaaccgcgctcggcgcgctgctcggccacatcaccggcggcgccgacgcaggc
agctatcagccgatgaacgtcaatttcgggctgttcccgccgctcgcggacgatatccgc
aagaaggaccgcaagcgcggctataccgaccgtgcccgcgaggcactggcggcatggcag
acgcaggccctacgcaacagggtggcggtgagcgcctga
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