Saccharothrix syringae: EKG83_05335
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Entry
EKG83_05335 CDS
T06258
Name
(GenBank) helicase
Organism
ssyi
Saccharothrix syringae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
SWIM
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFZ16966
UniProt:
A0A5Q0GS95
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All DBs
Position
1131184..1134411
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AA seq
1075 aa
AA seq
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MRVTHLQVDLADVEHVVGRTTYDRGTDYALRGAVLGVAWDDADTALHGTVRGRGDVYEVS
AYFDEVDDGVVDFAHGECTCPVGLNCKHVVAVVIAATRRPRGGRKPKTTWDEAFRDLLGT
GRHAGGDAPLAVELTLAPDKPHDRIGPAVHARIVRQGKTGWVASGLGWNQLDAYQVKDYR
AAHVRLLRELYGLYLAGTRPGYHSYYDTRTIQLTSFDSAKLWPLLDEAREAGLRLVHGRR
SWGDVEASAVARIALDVTRAGKSDRVRPVIEVDGATSGIEPIGFIGSDGHGLVYADPTCA
PVGADGRHRHFRLARFATPVPPGLRELVIDDKHLTVPEAGRDRFRAEIYPRLRRLAPVTS
SDGTFTPPDISGPTLVVRTEFGAGHDVGVHWEWAYEIGDSRLRVPLDAAGADDGYRDLDA
ERAVLASVEHVVPHPDRLALSGLDTVRFVTGTLPLLAGHPGVEVETTGEPVDYREVSDAV
SIGVSTAELAGETDWFDLGVTIGVEGAPVPFVEVFSALSRGESHVLLPDGAYFSLDKPEL
RALTGLIDEARTLQDAPGGELRISRFQAGLWEELAGLGVVERQAEAWRRQVEGLLSGEAV
RAHQVPATLDARLRPYQVDGFRWLAFLWEAGLGGILADDMGLGKTVQSLALICHAKATRP
GGPPFLIVAPTSVVSNWTAEAARFAPGLDVVAVPDTARRRGVPLDELIAGADVVVTSYAV
FRIDFDAYSAVPWSGLVLDEAQFAKNHQSKLHQCARVLPAPFKLAITGTPMENNLMELWS
LLSITAPGLFPNPARFREYYGLPIEKRGDADRLARLRRRIKPLVKRRTKEQVVADLPAKQ
EQVLEVELHPQHRKVYQTHLQRERQKVLGLVDDVDRNRFTILRSITLLRRLSLHAGLVDD
RHDELPCGKIDALVGQLRDVVDGGHRALVFSQFTGFLDKVRARLDAAGIEYCYLDGRTRG
RAAVLKRFKEGAAPVFLISLKAGGFGLNLTEADYCFLLDPWWNPATEAQAVDRTHRIGQT
RNVIVYRLVATDTIEEKVMALKAKKAELFTSVMDDGDVFGTALDADDIRELFAPS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgacccacctccaggtggacctggccgatgtcgagcacgtcgtcggccggacc
acctacgaccggggaaccgactatgcgctgcggggcgccgtcctgggcgtggcgtgggac
gacgcggacaccgcgctgcacggcacggtgcgcggtcggggcgacgtctacgaggtgtcc
gcatatttcgacgaagtcgacgacggcgtcgtcgacttcgcccacggtgagtgcacctgc
cccgtggggttgaactgcaagcacgtggtggcggtggtcatcgccgccacccggcggcca
cgcggcggcaggaagccgaagacgacctgggacgaggcgttccgggacctgctcgggacg
ggccggcacgccggcggggacgcgccgctggccgtcgagctgacgctcgcgccggacaag
ccgcacgaccggatcggccccgccgtgcacgcgcggatcgtgcggcagggcaagaccggg
tgggtcgcgagcggactgggctggaaccagctcgacgcctaccaggtcaaggactaccgc
gccgcccacgtgcggctgctgcgggagctgtacgggctgtacctggccggcacccgcccc
ggctaccactcctactacgacaccaggaccatccagctgacctcgttcgactccgccaag
ctctggccgttgctcgacgaggcgcgggaagccggcctgcggctggtccacgggcgcagg
tcgtggggcgacgtggaagcctccgcggtggcgcggatcgccctcgacgtcaccagggcc
ggcaaatccgaccgggtccgcccggtgatcgaggtggacggtgccacgtccgggatcgaa
ccgatcggcttcatcggctccgacggccacggcctggtctacgcggacccgacgtgcgca
ccggtcggagccgacggccgccaccggcacttccggctcgcgcggttcgccacaccggtc
ccaccggggctgcgggaactggtgatcgacgacaagcacctcaccgtccccgaggccggc
cgcgaccggttccgcgccgagatctacccgcgcctgcggcgcctggcccccgtgacctcc
tccgacggcaccttcacacccccggacatctccggccccaccctcgtcgtgcgcaccgag
ttcggcgcggggcacgacgtgggcgtccactgggagtgggcctacgagatcggggactcc
cggctgcgcgtgccgctggacgcggccggggcggacgacggctaccgcgacctcgacgcg
gaacgcgccgtgctggcctcggtcgagcacgtcgtcccgcaccccgaccggctcgccctg
agcggcctggacaccgtgcggttcgtcaccgggacgctgccgctgctcgccgggcacccc
ggcgtcgaggtcgagaccaccggtgagccggtcgactaccgcgaggtgagcgacgcggtg
tcgatcggcgtgtcgaccgcggaactggccggggagaccgactggttcgacctcggtgtc
acgatcggcgtcgagggcgcaccggtgccgttcgtcgaggtgttctcggcgctgagccgg
ggcgagtcgcacgtgctgctccccgacggcgcctacttctccctcgacaagcccgaactc
cgcgcgctcaccgggctgatcgacgaagcccggaccctccaggacgcccctggcggcgaa
ctgcggatcagccgcttccaagccggcctgtgggaggaactggccggcctcggcgtcgtc
gaacgccaagcggaggcgtggcggcgtcaggtcgagggcctgctgtccggcgaggccgtc
cgcgcccaccaggtgcccgccaccctcgacgcccgactgcgcccctaccaggtcgacggc
ttccgctggctcgccttcctctgggaagccgggctcggcggcatcctcgccgacgacatg
gggctcggcaagacggtgcagtcgctggcgctgatctgccacgcgaaggcgaccaggccc
ggcggaccgccgttcctcatcgtcgcgcccacgagcgtcgtgtccaactggaccgccgaa
gcggcgcgcttcgcacccggcctggacgtcgtcgccgtgcccgacaccgcccggcggcgc
ggcgtgccgctggacgagctcatcgccggagcggacgtggtggtcacctcgtacgcggtg
ttccggatcgacttcgacgcctactcggccgtgccgtggtccggactcgtgctggacgag
gcccagttcgccaagaaccaccagtcgaagctccaccagtgcgcacgggtcctcccggcg
cccttcaagctggcgatcaccggcactccgatggagaacaacctcatggagctgtggtcg
ctgctgtcgatcaccgcgcccgggctgttcccgaacccggcccggttccgggagtactac
ggcctgcccatcgagaagcgcggggacgccgaccggctggcgcggctgcggcggcgcatc
aagccgctggtcaagcgccgcaccaaggaacaggtcgtcgccgacctgcccgccaagcag
gagcaggtgctcgaagtggagctgcacccgcagcaccgcaaggtctaccagacccacctc
cagcgggagcggcagaaggtgctcggcctggtcgacgacgtggaccggaacaggttcacg
atcctgcggtcgatcaccctgctgcgcaggctcagcctgcacgccgggctggtcgacgac
cggcacgacgagctgccgtgcggcaagatcgacgcgctggtcggacagctccgcgacgtg
gtcgacggcgggcaccgggccctcgtcttcagccagttcaccggcttcctggacaaggtc
cgcgcccggctcgacgccgccgggatcgagtactgctacctcgacggcaggacccgcggt
cgcgcggccgtgctcaagcggttcaaggaaggtgccgcgccggtcttcctgatcagcctg
aaggcgggcgggttcgggctcaacctcaccgaggcggactactgcttcctgctcgacccg
tggtggaacccggcgaccgaggcgcaggccgtggaccggacccaccgcatcggccagacc
cgcaacgtcatcgtgtaccgcctcgtcgcgaccgacaccatcgaggagaaggtgatggcg
ctgaaggcgaagaaggccgagctgttcaccagcgtcatggacgacggcgacgtcttcggc
accgccctcgacgccgacgacatccgcgagctgttcgcaccgtcgtga
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