Starkeya sp. ORNL1: G3545_11550
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Entry
G3545_11550 CDS
T06785
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
star03000
]
G3545_11550
Transcription factors [BR:
star03000
]
Prokaryotic type
Helix-turn-helix
Other families
G3545_11550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
AAA
Mg_chelatase
MCM
HTH_28
Xre-like-HTH
HTH_17
HTH_50
AAA_16
HTH_30
IclR
HTH_22
HTH_23
IstB_IS21
HTH_29
HTH_38
HTH_7
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QJP14229
UniProt:
A0A858X349
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Position
2396333..2398300
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AA seq
655 aa
AA seq
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MNLQREHLARIFSTVENPRPVSSYAMVDGNEWRPFAASWTRCIHSHGLDPAKSAPLTALG
PTELHEHRQSYEEWLRIAGDELDHLFAAVRVIGFSVSFASPEGVILAERSDYSKDHYCEA
DRPGTVWSENIVGTNGVGTALAEMRSTAVYLGDHFYADFANYCCVATPVFGPEAELMGAI
NLSVCNPLMQEETHRLVYGIAQRSAERLDERAFRERFRAHSVVRLTPRAGRAALIALDVD
QQIVGADRAARGLLGMAESTPGGSVWSYFERDRRLVENGTTPASFELRGLRAGLRVTASL
TPPLDRAIAARPVAKAGHSLDDRDSARPRLPAPAAAAAIPDLDACAGSDPRMLNNARLLR
RVIGSRLPILLLGETGVGKDTLARAIHLESERAGKPFVAFNCAAVPETLIDSELFGYGSG
AFTGARREGNAGRLAEADGGVLFLDEIGDMPYALQTRLLRVLETGEVMPLGAGKMRRVDI
QVIAATNQDLEKRIAARTFRQDLYYRLAGAVIHVPSLRERTDLDGLIDRLLAHAAEGRDI
RLDPAARSVLRSHRWPGNVRELKHVLFRAVQIANGGVIRPADLMMGHEGAMAVDDALDEP
AETGGAAKAAVAAAERGAIAEAMERAGGNVEACARLLGMSRATLYRKIRRHGLEF
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcagcgtgaacacctcgcccgcatcttctcgaccgtcgaaaatccgcgtccc
gtctcgtcctatgcgatggtcgacggcaatgagtggcggccgttcgcggcgtcctggacg
cgctgcatccacagccacggcctcgaccccgccaagagcgcgccgctgaccgcgctcggc
ccgaccgagctgcacgagcaccggcagtcctatgaggagtggctgcggatcgccggcgac
gagctcgaccatctgttcgcggcggtgcgggtcatcggcttctcggtgagcttcgccagt
cccgagggcgtgatcctcgcggagcgctcggactacagcaaggaccattattgcgaggcc
gaccggcccggtacggtgtggagcgagaatatcgtcggcaccaatggcgttggcaccgcg
cttgccgagatgcgctcgaccgcggtctatctcggcgatcatttctatgcggacttcgcc
aactattgctgcgtcgcgacgccggtgttcgggcccgaggcggaactgatgggtgcgatc
aacctctccgtctgcaatccgctgatgcaggaggagacacaccggctggtctatggcatt
gcccagcgcagcgccgagcggctggacgagcgcgccttccgcgagcgattccgcgcccac
agcgtcgtccggctgaccccgcgcgccggccgtgccgcgctgatcgcgctcgacgtcgac
cagcagatcgtcggcgccgaccgcgccgcgcgcggtttgctcggcatggcggagagcacg
ccgggcggttcggtctggagctatttcgagcgcgaccgtcgcctcgtcgagaatggcacc
acgcccgcctccttcgagctgcgcggcctccgggcgggactgcgcgtgaccgcctcgctc
accccgccgctcgaccgcgccatcgcggcgcgccccgtggcgaaggccggccatagcctg
gacgatcgcgattcggcgcgcccccgcctgccggcaccggcggccgccgctgccatcccc
gatctcgacgcctgcgccggcagcgatccgcgcatgctgaacaatgcgcggctgctccgc
cgcgtcatcggctcgcgcctgcccatccttctgctgggcgagaccggcgtcggcaaggac
acgctcgcgcgcgccatccatctggagagcgagcgcgccggcaagccgttcgtcgccttc
aactgcgctgcggtcccggagacgctcatcgacagcgagctgttcggctatggcagcggc
gccttcaccggcgcgcgccgggagggcaatgccggccgcctcgccgaggccgatggcggc
gtgctgttcctcgatgagatcggcgacatgccctatgcgctgcagacccgcctgctgcgg
gtgctggagaccggcgaggtgatgccgctcggcgccgggaagatgcggcgcgtcgacatc
caggtgatcgccgcgaccaaccaggacctcgagaagcgcatcgcggcgcgcaccttccgc
caggatctctattatcgcctcgccggcgcggtcatccatgtgccgagcctgcgcgagcgg
actgacctcgacgggctgatcgaccgcctgctcgcgcatgccgcggaggggcgcgacatc
cgcctcgatccggcggcgcggagcgtgctgcgctcgcatcgctggccgggcaatgtgcgc
gaactgaagcacgtgctgttccgtgccgtgcagatcgcgaatggcggcgtcatccgcccc
gccgacctgatgatgggccatgagggcgcgatggccgtcgacgacgcgctcgatgagccg
gccgagaccggcggcgcggcgaaggccgccgtcgctgctgccgagcgcggcgccatcgcc
gaggcgatggagcgtgccggcggcaatgtcgaggcctgcgcccgcctgctcggcatgagc
cgggcgacgctctaccgcaagatccgccgccacgggctggagttctga
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