Sphingomonas taxi: MC45_08000
Help
Entry
MC45_08000 CDS
T03398
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
stax
Sphingomonas taxi
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stax03016
]
MC45_08000
Enzymes [BR:
stax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MC45_08000
Transfer RNA biogenesis [BR:
stax03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MC45_08000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF3073
RNase_H_2
CNOT1_HEAT
Motif
Other DBs
NCBI-ProteinID:
AIT06332
UniProt:
A0A097EFI4
LinkDB
All DBs
Position
1778638..1779258
Genome browser
AA seq
206 aa
AA seq
DB search
MTVHFHEEDLPADVFAPGASIAVDTETMGLITPRDRLCVVQLSDGGPDEHLVRFGPTSDY
AAPNLKAVLADPGRVKLYHYGRFDIAALQHYLGIVAAPAYDTKIASRLIRTYTDRHGLKE
LVRELLGQELSKQQQSSDWGAPELSDAQKDYAASDVRFLHRLQAELNRRLEREGRMEMAQ
ACFDFLPTRAALDLAGWPEIDIFAHA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacacttccacgaggaagacctccccgccgacgtcttcgcccccggcgcctcg
atcgccgtcgataccgagacgatgggcctcatcacgccgcgcgaccggctgtgcgtcgta
caattgtccgatggcggccccgacgaacatcttgtccgtttcggtccgaccagcgactat
gctgcgccgaacctcaaggcggtgcttgccgatcccggccgcgtgaaactctaccattac
ggccgcttcgatatcgccgcgctccagcattatctcggcatcgtcgcggcgcccgcctac
gataccaagatcgcgtcgcgactgatccgcacctataccgatcgtcacggcctcaaggaa
ctcgtgcgcgaactgctcggccaggaactcagcaagcagcagcaatcgtccgactggggc
gcgcccgaattgtccgacgcgcagaaggactatgcggcaagcgacgtgcgcttcctccat
cgcctgcaggccgagctcaaccgccggctcgaacgcgagggccggatggagatggcgcag
gcctgtttcgacttcctgccgacccgcgccgcgctggacctcgccggctggcccgagatc
gacatcttcgcccatgcctga
DBGET
integrated database retrieval system