KEGG   Sphingomonas taxi: MC45_08000
Entry
MC45_08000        CDS       T03398                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
stax  Sphingomonas taxi
Brite
KEGG Orthology (KO) [BR:stax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:stax03016]
    MC45_08000
Enzymes [BR:stax01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     MC45_08000
Transfer RNA biogenesis [BR:stax03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MC45_08000
SSDB
Motif
Pfam: DNA_pol_A_exo1 DUF3073 RNase_H_2 CNOT1_HEAT
Other DBs
NCBI-ProteinID: AIT06332
UniProt: A0A097EFI4
LinkDB
Position
1778638..1779258
AA seq 206 aa
MTVHFHEEDLPADVFAPGASIAVDTETMGLITPRDRLCVVQLSDGGPDEHLVRFGPTSDY
AAPNLKAVLADPGRVKLYHYGRFDIAALQHYLGIVAAPAYDTKIASRLIRTYTDRHGLKE
LVRELLGQELSKQQQSSDWGAPELSDAQKDYAASDVRFLHRLQAELNRRLEREGRMEMAQ
ACFDFLPTRAALDLAGWPEIDIFAHA
NT seq 621 nt   +upstreamnt  +downstreamnt
atgaccgtacacttccacgaggaagacctccccgccgacgtcttcgcccccggcgcctcg
atcgccgtcgataccgagacgatgggcctcatcacgccgcgcgaccggctgtgcgtcgta
caattgtccgatggcggccccgacgaacatcttgtccgtttcggtccgaccagcgactat
gctgcgccgaacctcaaggcggtgcttgccgatcccggccgcgtgaaactctaccattac
ggccgcttcgatatcgccgcgctccagcattatctcggcatcgtcgcggcgcccgcctac
gataccaagatcgcgtcgcgactgatccgcacctataccgatcgtcacggcctcaaggaa
ctcgtgcgcgaactgctcggccaggaactcagcaagcagcagcaatcgtccgactggggc
gcgcccgaattgtccgacgcgcagaaggactatgcggcaagcgacgtgcgcttcctccat
cgcctgcaggccgagctcaaccgccggctcgaacgcgagggccggatggagatggcgcag
gcctgtttcgacttcctgccgacccgcgccgcgctggacctcgccggctggcccgagatc
gacatcttcgcccatgcctga

DBGET integrated database retrieval system