Sporomusa termitida: SPTER_00310
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Entry
SPTER_00310 CDS
T06115
Symbol
sigH
Name
(GenBank) RNA polymerase sigma-H factor
KO
K27000
RNA polymerase sigma-H factor
Organism
sted
Sporomusa termitida
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sted03021
]
SPTER_00310 (sigH)
Transcription machinery [BR:
sted03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPTER_00310 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_38
HTH_16
HTH_30
DUF1676
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QDR78787
UniProt:
A0A517DNA9
LinkDB
All DBs
Position
31281..32036
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AA seq
251 aa
AA seq
DB search
MRVNTQRDLYGCFDNLTDEEIVFDAKDNDNTVALEYLINKYRNFVRAKARSYFLIGAERE
DIIQEGMIGLYKAIRDFRNDKLSSFRAFAELCVTRQIITAIKTATRQKHIPLNSYVSLNK
PIYDEDSDRTLLDVLSGSKVTDPEELVISREEFVDIEEKMGEILSDLEWKVLMSYLDGKS
YQEIAVELDRHVKSIDNALQRVKRKLERYLENRGEDSDIRGMYRGLTGLNKEVPADLNNY
SDSYDDQRSIK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttaatactcaacgcgatctgtatggttgttttgacaacttaactgatgaagaa
atagtatttgacgccaaagataatgacaacacggtcgctctggagtatttgattaataaa
tatcgcaactttgtgcgggctaaagccagatcgtattttttaatcggcgctgagcgtgag
gacatcatccaggaaggcatgattggtttatataaggccattcgcgatttccgcaatgat
aagctgtcatcgtttcgagcttttgcggaattgtgtgtaactcggcaaattattaccgcc
attaagaccgccactagacagaagcatattcccttgaattcgtatgtttctttaaataaa
cccatttatgatgaagattctgaccggacgctattagatgtgttatccggctctaaagtc
actgatccggaagaactggtaatcagccgtgaagagtttgttgatattgaagagaaaatg
ggcgagattttaagcgatctggagtggaaggtactgatgtcatatcttgatggcaagtct
tatcaagaaattgccgttgaacttgaccgtcatgtcaaatcgattgataatgctctgcaa
agagtaaaacgtaaactggagcgatatctggaaaatcgcggtgaagacagcgatattcgg
ggtatgtacagaggcctaaccggcctgaataaagaggttccggcagatctaaacaactac
agtgacagctatgatgaccaacgtagtataaaatga
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