Sporomusa termitida: SPTER_46860
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Entry
SPTER_46860 CDS
T06115
Symbol
dacB_3
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sted
Sporomusa termitida
Pathway
sted00550
Peptidoglycan biosynthesis
sted01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPTER_46860 (dacB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sted01002
]
SPTER_46860 (dacB_3)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sted01011
]
SPTER_46860 (dacB_3)
Enzymes [BR:
sted01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SPTER_46860 (dacB_3)
Peptidases and inhibitors [BR:
sted01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SPTER_46860 (dacB_3)
Peptidoglycan biosynthesis and degradation proteins [BR:
sted01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SPTER_46860 (dacB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QDR83205
UniProt:
A0A517E0S0
LinkDB
All DBs
Position
complement(4980635..4981795)
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AA seq
386 aa
AA seq
DB search
MGCLILRSAALSLLLLCTVVTGIALAAPPVLSAQGAILMDFKTGQVLHDRNINKKLAPAS
TTKIMTAIIAIESGRLDETVHISAAAAGTSGSSLNLYPGQIITLRELVTGLLLRSGNDAA
VAIAEHLAGSVTGFVEIMNRKAASIGAVHTHFSNPHGLSAPNHLSTAFDLAWITRYALSN
PTFAEIVSTKETNIEWLDRKGKSQDRNLRNTNKLLWMLEDADGVKTGTTNRAGPCLVSSA
TRGNQKLIAVVLNDHSRWFDSMQLLKYGFDAFDLYEYAEQGTILTSLPVENGMTGMVDAI
VEAPGSLVISTEDYTAVTVEVDLPEKIKAPVYQGQKIGEIIFYIQDKAVKTVDIIAGNAV
EESTISKILLRHWLDTMRRLSSWGVL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcctgattttacgctctgccgccttaagtctactactgctctgcacggttgtt
accggtattgcgctggcggcaccgccggtattgtctgcccagggggcgattttaatggat
tttaaaaccggccaggtgctccatgaccgcaatataaacaaaaagctcgcgcccgccagt
acgactaaaattatgactgcgatcattgctatcgaaagcgggcgcctggatgaaaccgtt
catatcagtgctgccgctgccggtaccagcggctcttcacttaatctctatcccggtcaa
attattactctccgggagttggtcaccggcctgctgctccgctccggcaatgatgccgcc
gtagcaattgccgagcatcttgccggttctgttactggttttgtggaaattatgaacagg
aaagcggccagcatcggtgcagtccatactcatttcagcaacccccatggcctttcagcc
cccaaccatctgtccacagccttcgatttggcctggatcacccggtatgccttgagcaac
ccgaccttcgccgagatcgtgagtacgaaggaaacaaatatagaatggcttgacagaaaa
ggaaaaagtcaggaccggaatctccgtaataccaacaaattgctgtggatgctggaggat
gccgatggtgtaaaaacagggaccaccaatcgcgccggaccatgtttggtatccagtgca
acgcggggcaaccaaaagcttattgccgtcgtattaaatgatcattcgcgctggtttgac
tcgatgcagctcttaaagtatggttttgatgcttttgacttatatgaatatgcggagcag
ggaacgatacttacctcactgccagtggaaaacggaatgaccgggatggttgacgccatt
gtcgaggccccgggctcgctggtaataagtactgaagattacacggcagtaacagtggag
gttgatttaccggaaaaaataaaagccccggtatatcagggccagaaaatcggcgagatt
atattttatatacaggataaagcggtaaaaactgtcgacattatcgccggcaatgccgtt
gaagaaagcactataagcaaaattctgctccgccactggctggataccatgaggcggtta
tccagctggggggtattataa
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