Stenotrophomonas sp. KCTC 12332: AXG53_03530
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Entry
AXG53_03530 CDS
T04408
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXG53_03530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stek03000
]
AXG53_03530
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_03530
Enzymes [BR:
stek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AXG53_03530
Transcription factors [BR:
stek03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AXG53_03530
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXG53_03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AMJ55810
UniProt:
A0A126NFT5
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All DBs
Position
795911..797401
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AA seq
496 aa
AA seq
DB search
MQTFLMPAHVQCEQARLARDARFDGLFYTAVRSTGIYCRPVCPAPPPKPENVSYYPSAAA
ASAAGYRPCLRCRPELSPDDANLLQDQTLHQALALLNEGILQEQPATALADAMGLSARQL
QRLFVARLGATPAQLHTTRRLLLAKQLLTETALPVTQIALAAGFNSLRRFNSAFLEGCGM
PPSALRKQHSAVAGGEPVLRLAYRPPLDFSLMLGFLRRRSLPGIECIDDDSYQRVVVANG
VASLIRVTADPKRPELRLQLGTTDPRAIPAIVAKVRRVFDLDADLRTVHASLAQEPLLAR
GLVERPGLRIPGGWDGFEVAARAVLGQQVSVAAATTLARRLVDRFGEHLAGMPEGLDRQF
PAPATLVEAPLESIGLPRTRAATLRAIARACAEDRLDFSRAQTLESFVQKATALPGIGPW
TAHYMALRAMGLPDAFPAGDLVLQQVLGEGQRLSERETERRSQLWRPWRAYAVLHLWHLA
VPTEKKNPKTATEASA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactttcctgatgcccgcacacgttcaatgcgaacaggcccgcctggcccgcgac
gcgcgctttgacggcctgttctataccgccgtgcgcagtaccggcatctattgccgcccg
gtgtgccctgccccgccgcccaagccggagaacgtcagctattaccccagcgccgcggcc
gccagcgccgccggctaccggccgtgcctgcgctgccgccccgaactgtccccggatgac
gccaacctgctgcaggaccagaccctgcaccaggccttggcactgctcaacgagggcatc
ctgcaggagcaaccggccaccgccctggccgacgcgatggggctcagcgctcgccagctg
cagcgcctgttcgtcgccaggctgggcgccacacctgcccagttgcacaccacccgccgc
ctgctgctggccaaacagctgctgacggaaaccgccctgccggtgacccagatcgcactg
gccgctggcttcaacagcctgcgccgcttcaacagtgccttcctcgagggctgcggcatg
ccgcccagcgcgctgcgcaagcagcacagcgcggtcgccggcggcgaaccggtgctgcgc
ctggcctaccggccgccgctggatttcagcctgatgctgggcttcctacgccggcgctcg
ttgccaggcatcgaatgcatcgatgacgacagctaccagcgcgtggttgtggccaatggc
gtggccagcctgatccgggttaccgccgaccccaaacggccggaactgcgcctgcaactg
ggcaccaccgatccgcgcgccatcccggccatcgtcgccaaggtgcgccgcgtgttcgac
ctggatgccgacctgcgcaccgtgcatgccagcctggcacaggagcccctgctggcccgc
ggcctcgtcgaacggcccggcctgcgcattcccggcggctgggacggattcgaagttgcc
gcgcgcgccgtgcttggccagcaggtcagtgttgctgccgccaccacgctggcgcgccgc
ctggttgaccgttttggcgaacacctggcgggcatgcccgaaggcctggaccggcagttc
ccggcccccgccacgctggtcgaggccccactggaaagcatcggcctgccacgtacgcgc
gccgctaccctgcgcgccatcgcccgcgcctgcgccgaagaccggctggacttcagccgc
gcgcagacgctggaaagtttcgtgcagaaggccaccgccctgcccggcatcggcccatgg
acagcgcattacatggcgctgcgcgcgatggggctgcccgatgccttccccgctggcgac
ctggtgctgcagcaggtactgggcgaaggccagcgcctgagcgagcgcgagaccgaacgc
cgttcacaactctggcggccatggcgtgcctacgccgtgctgcacctatggcacctggca
gtgccgacggaaaaaaagaatcccaagactgcaacggaggccagcgcatga
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