Stenotrophomonas sp. MYb57: CLM74_04185
Help
Entry
CLM74_04185 CDS
T05384
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLM74_04185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stem03021
]
CLM74_04185
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_04185
Enzymes [BR:
stem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLM74_04185
Transcription machinery [BR:
stem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLM74_04185
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLM74_04185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AVJ32038
LinkDB
All DBs
Position
925780..926778
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERITDTRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHSGDNATLSLSKQGPGVVTAADIKVDHN
VEILNGDHVICHLTKDTAVNMRLKIERGFGYQPAAARRRPDEETRAIGRLVLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPANNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVASHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgtcctcgcggtccgcagatcgaacgcattacc
gacacccgtgcaaaggtcgttatcgaacctttggagcggggttacgggcatacgctgggt
aatgccctgcgtcgcgtgctgctgtcgtccatcccgggcttcgccatcacggaagtcgaa
atcgacggcgtgttgcatgagtacaccacggtcgaaggtctgcaggaggacgtgctggaa
gtcctgctgaacctgaaggacgtggccatccgtatgcactccggcgacaacgcgactctg
tccctgtccaagcagggtccgggcgttgtcaccgctgccgacatcaaggtcgaccacaat
gtggagatcttgaacggcgaccacgtgatctgccacctgaccaaggacacggcagtgaac
atgcgtctgaagatcgagcgtggtttcggctatcagccggcagctgcgcgtcgtcgtccg
gacgaagaaacccgtgccatcggccgtctggtcctggatgcctcgttctcgccggtccgc
cgtgtcgcctatgccgtggaagcggctcgtgtcgaacagcgcaccgacctggacaagctg
gtcatcgatatcgagaccaacggcaccatcgacgccgaagaagcagtgcgtaccgctgcc
gacatcctcagcgatcagctgtcggtgttcggtgacttcacccatcgcgaccgcggtgcg
gcgaagccggccaacaacggcgtggatccggtgctgctgcgcccgatcgacgatctggag
ctgaccgtgcgttcggccaactgcctcaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtcgagctgctgaagaccccgaacctgggtaagaagtcgctcacc
gagatcaaggaagtgctggcccagcgtggcctgtcgctcggcatgaagctggagaactgg
ccgccggccggcgtcgccagccacggcatgctgggctga
DBGET
integrated database retrieval system
