Stenotrophomonas sp. MYb57: CLM74_06215
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Entry
CLM74_06215 CDS
T05384
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_06215
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CLM74_06215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
ChlI
DnaB_C
AAA_22
AAA_16
Lon_C
GvpD_P-loop
SLFN-g3_helicase
AAA_24
PAXNEB
AAA
AAA_30
RecA
nSTAND3
Rad51
MCM
AAA_19
DAP3
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AVJ32399
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All DBs
Position
1351245..1352621
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AA seq
458 aa
AA seq
DB search
MAKARTAYVCNECGAEYSKWQGQCTECNAWNSLSEIVLESAAAAKAPASRRAGWAGKIDP
PKITALKDVAQTEHNRVSTGIGEFDRVLGGGLVEGAVVLVGGDPGIGKSTLLLQAVAKMA
AVLPVLYVTGEESLAQVAGRAHRLELPLEGVNALAETGVESILQHATKSGPRLIVADSVQ
TLWTETLTAAPGSVSQVRESAARLVRFAKETGTAVFLVGHVTKEGGIAGPRVLEHMVDAV
LYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGDKGLKEVSNPSAIFLSGASTHQPGSCV
MVTREGTRPLLVEVQALVDASPLSNPRRVAVGLEQNRLAMLLAVLHRHGGVLVGDQDVFV
NVVGGIRVQETAADLPVLLAVLSSLQDRPLAEKTIAFGEVGLSGEIRPVPNGEDRLREAA
THGFKRAIVPKANAPKGGSVKGMEVIAVERLSEAIDAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcccgcaccgcgtatgtctgcaatgaatgcggcgccgaatacagcaagtgg
caaggccagtgcaccgagtgcaatgcctggaactcgctgtcggaaatcgtccttgagagc
gctgcggcggccaaggcgcccgcctcgcgccgtgccggctgggcgggcaagatcgacccg
ccgaagatcaccgcactgaaggacgtggcgcagaccgaacacaaccgggtcagcaccggc
atcggtgaattcgaccgcgtgctcggcggcggcctggtcgagggcgcggtggtgctggtc
ggtggtgatccgggcatcggcaaatccaccctgctgctgcaggcggtggcgaagatggct
gcggtcctgccggtgctctacgtcaccggtgaagaatcactggcccaggtcgccggccgc
gcgcatcggctggagctgccgctggagggcgtcaacgcgctggccgagaccggtgtcgaa
tccatcctgcagcacgccaccaagagtgggccgcggctgatcgtggccgattcggtacag
accctctggaccgagacgctgaccgccgcgcccggttcggtcagccaggtgcgcgagagt
gccgcacggctggtgcgtttcgccaaggaaaccggaaccgccgtgtttctggtcggccat
gtgaccaaggaaggcggcatcgccggcccgcgcgtgctggagcacatggtcgatgccgtg
ctgtatttcgagggcgagagtggcagccgcttccgcctgctgcgcgcgttcaagaaccgc
tttggtgcggtcaacgagctgggcgtgttcgcgatgggcgacaagggcctgaaggaggtc
tccaatccgtcggcgatcttcctttccggtgccagcacgcaccagccgggcagctgcgtg
atggttacccgcgagggcacccggccgctgctggtggaagtgcaggcgctggtcgacgcc
tcgccgctgtccaatccgcgccgcgtggcggtggggctggagcagaaccgcctggccatg
ctgctggcggtgctgcatcggcatggcggcgtgctggtcggcgaccaggacgtgttcgtc
aacgtggtcggcggcatccgcgtgcaggagaccgccgccgacctgccggtgctgctggcg
gtgctgtcctcgctgcaggaccgtccgctggccgagaagaccatcgcattcggcgaagtc
ggcctgtccggtgagatccggccggtgcccaacggcgaggaccgcctgcgcgaggcggcg
acccacggtttcaagcgcgccatcgtgcccaaggccaatgcccccaagggcggctcggtg
aagggcatggaagtgatcgcggtcgaacgcctgtccgaggcaatcgacgcggcgtga
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