Symbiobacterium thermophilum: STH940
Help
Entry
STH940 CDS
T00196
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STH940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH940
Enzymes [BR:
sth01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
STH940
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STH940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAD39925
UniProt:
Q67QW8
LinkDB
All DBs
Position
1055355..1055888
Genome browser
AA seq
177 aa
AA seq
DB search
MTRALPDYLAPGLRVVFVGFNPGETSAREGHYYAYPGNRFYWLLWQAGLTERRYAPHEDA
RLLEIGYGLTDLVGRSTRSSGDLSAAELRSGREELLAKLARYRPRVACYNGKGIYAALTG
RRRVAYGLQPESVIPGVLDFVAASPSGRSREPLAEKLRLYRELRALIAEGDEGERLG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgggccctgccggactacctggccccggggctgcgcgtggtcttcgtcggtttc
aaccccggggagacgtcggcccgggaggggcactactatgcctatccgggtaaccggttt
tactggctcctctggcaggccgggctcacggagcggcgctacgccccgcacgaggatgcc
cggctcctggagatcggctatgggctgacggatctggtgggccgctccacccgctccagc
ggcgacctttcggctgcggagctgcggtccggacgggaggagctgctggccaagctggcc
cggtaccggccgcgagtggcctgttacaacggcaagggcatctacgcggcgctgaccggc
cgccggcgggtggcgtacggcctgcagccggagtcggtgatccccggggtgctggatttt
gtggcggcctctcccagcgggcggagccgggagcccctggcggagaagctgcggctctac
cgggaactgcgcgcgctgatcgcggagggggatgagggtgagcgactggggtga
DBGET
integrated database retrieval system
