Sphingobacterium thalpophilum: NCTC11429_02694
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Entry
NCTC11429_02694 CDS
T06778
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11429_02694 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stha03019
]
NCTC11429_02694 (recQ_1)
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_02694 (recQ_1)
Enzymes [BR:
stha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11429_02694 (recQ_1)
Messenger RNA biogenesis [BR:
stha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11429_02694 (recQ_1)
DNA repair and recombination proteins [BR:
stha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC11429_02694 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
TrmB
HemN_C
Motif
Other DBs
NCBI-ProteinID:
VTR42416
UniProt:
A0A4U9V713
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All DBs
Position
1:3106236..3108137
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AA seq
633 aa
AA seq
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MTLDSLSILRQYWGFESFRPLQEEIIQSVMSGKDTLALLPTGGGKSICFQVPALMKEGIC
IVVTPLIALMKDQVEHLQKNGIQAVAIYSGMKKREVDITLDNCVYGQIKFLYLSPERLYS
DLVRERIRYMKVNLFAVDEAHCISQWGYDFRPPYLELARLRELHPDVPFLALTATATERV
IADIQRKLGFPASNVFVKSFLRDNLAYMAIEEEDKMGRMVRIIHKLGGSGIVYVRNRRET
LEIARILINNGISSDYYHAGLPGPERDQKQDAWMNNNIRVIVATNAFGMGIDKPDVRFVI
HLDLPDSLEAYYQEAGRAGRDGKKAYPVILYQKNDEQKLLDTLQVSFPDIPFIQQSYHYL
CNHFQIPYGAGAGITVDFDVVTFAKKYQLPLVPVMNALKFLERDGWLTLSEAVTIPSRFK
FEIDHTELYKVQVQYAKYDKLIKAILRTYGGVFENYILINEYEFANKLGIPYAKVVELLK
SLEGLEIASYLPSTDAPQLTFLQNRVDYKHLHIDHVFIRERHQVKEDQVNGMIGYIEKSH
CRSQSLLLYFGEKNAGFCQVCDLCLIRNHQENQRAKIKQEVKVSLLAGPKNLHDLVGGLT
VGSEKRRIEIIRELLDAEVIRLEANLYSWNTLF
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacattagatagtctatccatcttaagacaatattggggatttgaatccttccgacct
ttacaggaggaaatcatccaatcggtcatgtcgggtaaagataccctggcccttttgcca
actggcgggggaaagtctatttgttttcaggtgccggctctgatgaaagaagggatatgc
attgttgttaccccacttattgccctgatgaaagaccaggtcgaacatctgcaaaaaaat
ggtattcaggcagtggcgatttattccggaatgaaaaaacgggaagtggatattacctta
gacaattgtgtctacgggcagatcaagtttttgtatctttcgcccgaacggctttatagt
gatttggtcagggagcgtatacgttatatgaaggttaatctgtttgctgttgatgaagca
cattgcatctcccaatggggctatgatttccgcccgccgtatctggaattggccaggctc
agagaactgcatcccgacgtccccttcttggccctgacggcaacagcaacagagcgggtt
attgctgatatacagcgcaagctaggttttccggcgtcgaatgtgtttgtcaaaagtttc
ttgcgggacaatttggcgtatatggcaatcgaggaggaagataagatgggacgcatggtg
cgtattatccataagctgggcggctctggtatcgtttatgtcagaaatcgcagagagaca
ctggaaatcgcccgaatattgatcaacaatggtatctcgtcagattattatcatgcaggc
ctgcccgggccggaacgggaccaaaagcaagatgcctggatgaataacaatattcgtgtt
attgttgcgaccaacgcctttggaatggggatcgataagcctgatgtgcgatttgtgatc
catctggatctacctgactccttagaagcctattatcaagaggctggtagggcaggacgg
gacggaaaaaaagcttatccggtcattctctaccagaaaaatgatgaacaaaaattgctt
gacacgctgcaggtaagttttccggatattccttttatccagcagagttatcattaccta
tgtaaccacttccagattccctatggggctggagcagggattaccgtggattttgatgta
gttacatttgcgaagaagtatcagctgccgttggttccggtaatgaacgcgctgaagttt
ctggaacgtgatggctggctcacgttgtccgaagcagtaacaataccttcacggtttaaa
tttgaaatagatcataccgaactgtacaaggtgcaggtacaatatgcaaaatatgataaa
ttgatcaaggcaattttgcgtacctatggtggtgtatttgaaaattatattctgatcaat
gaatatgagtttgccaacaagctggggataccttatgcaaaggttgtcgaactgttaaag
tccttggaaggattggagatagcaagctatctgccgtctactgacgctccacagctaact
tttttacagaatcgcgttgactataaacacttgcatatcgatcatgtttttatccgcgaa
cgccatcaggtaaaagaagatcaggtcaatggaatgattggttatatcgaaaagtcacat
tgccgtagtcagtctttgctgctttatttcggagaaaagaatgcaggattttgtcaggtc
tgtgacctgtgcctgattcggaatcatcaggaaaaccagcgagcaaaaatcaagcaagaa
gttaaagtcagcttattggccggacccaaaaacctgcatgatcttgtcggtggtctgacg
gttggctcggaaaaaagaagaatagagattattcgtgagctacttgacgctgaggtcatc
cgtctggaggcaaatctctattcctggaacaccttattctga
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