Caldimonas thermodepolymerans: IS481_15320
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Entry
IS481_15320 CDS
T06911
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00061
Fatty acid biosynthesis
sthm00071
Fatty acid degradation
sthm01100
Metabolic pathways
sthm01212
Fatty acid metabolism
sthm02024
Quorum sensing
Module
sthm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IS481_15320
00071 Fatty acid degradation
IS481_15320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS481_15320
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sthm01004
]
IS481_15320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sthm04147
]
IS481_15320
Enzymes [BR:
sthm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IS481_15320
Lipid biosynthesis proteins [BR:
sthm01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
IS481_15320
Exosome [BR:
sthm04147
]
Exosomal proteins
Exosomal proteins of breast milk
IS481_15320
Exosomal proteins of breast cancer cells
IS481_15320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QPC31090
LinkDB
All DBs
Position
3253323..3255032
Genome browser
AA seq
569 aa
AA seq
DB search
MHGDGVYSSKPWLKHYPPNVPAEIDWRQYDSLSDLLEESFRKYASRNAAMCMDVPITFRQ
IEEMSSALGAWLQKQGLQRGARVAIMMPNVLPYPIAIAAILRAGYVVVNVNPLYTARELE
HQLKDSGAEAIIILENFAATLEEVIEHTAVRHVVLAAMGDLLGFWKGGLVNFVVRHVRKM
VPEYKLPVGNGRTVTRFNDVIAEGSRLHLNRPQLGPDDVAFLQYTGGTTGVSKGATLLHR
NVVANIIQTEAWFKPVLDRIGDKQLTVVCALPLYHIFALTVCYMMGARLGMMNLLIPNPR
DIPGFVKTLQKHRVNMFPAVNTLFNALANDPDFARLDFSELVVSNGGGMAVQQATAEKWL
KITGCPVVEGYGLSETSPVVTSNRLDLNEFTGTIGLPFPSTEVAIRDDDGNDVPIGEPGE
ICIRGPQVMAGYWNRPDETAKVMTSDGFFRSGDVGIMDERGYIKIVDRKKDMILVSGFNV
YPNEIEQVVNLHPGVLECAAIGVPDAKSGEAVKLFVVKKDPTLTEDDLMAYCRDNFTGYK
RPKYIEFRDELPKSNVGKILRRELRSSSN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcacggagacggtgtgtactcgtccaagccctggttgaaacattaccccccgaacgtg
cccgcggagatcgactggcggcagtacgactcgctgtccgacctgctcgaggaatccttc
cgcaagtacgcgtcgcgcaacgcggcgatgtgcatggatgtccccatcacgttccgccag
atcgaggagatgtcctcggccctgggggcgtggctgcagaagcaaggcctgcagcgcggc
gcacgcgtggccatcatgatgcccaacgtgctgccgtacccgatcgcgatcgccgcgatc
ctgcgcgcgggctacgtggtggtcaacgtcaacccgctgtacaccgcgcgcgagctggag
caccagctgaaggactccggcgccgaggccatcatcatcctggagaacttcgccgccacg
ctggaagaagtgatcgaacacaccgcggtcaggcacgtggtgctggccgcgatgggcgac
ctgctcggcttctggaagggcggcctggtcaacttcgtcgtgcgccacgtgcgcaagatg
gtgcccgagtacaagctaccggtcggcaacggccgcacggtgacgcgcttcaacgacgtg
atcgccgaaggcagccgcctgcacctgaaccgcccgcagctcggcccggacgacgtggcc
ttcctgcagtacaccggcggcacgaccggggtctcgaagggcgcgacgctgctgcaccgc
aacgtggtcgccaacatcatccagaccgaggcctggttcaagccggtgctcgaccgcatc
ggcgacaagcagctcaccgtggtctgcgcgctgccgctgtaccacatcttcgcgctgacg
gtctgctacatgatgggcgcgcggctgggcatgatgaacctgctgatccccaacccgcgc
gacatcccgggcttcgtgaagacgctgcagaagcaccgcgtcaacatgttcccggcggtc
aacacgctgttcaacgcgctggccaacgaccccgacttcgcgcggctggatttctccgag
ctggtggtcagcaacggcggcggcatggccgtgcagcaggccacggccgagaaatggctc
aagatcaccggctgcccggtggtcgagggctacgggctgagcgagacctcgccggtggtc
accagcaaccgcctcgacctcaacgagttcaccggcaccatcggcctgcccttcccgtcg
accgaggtcgcgatccgcgacgacgacggcaacgacgtgccgatcggcgaacccggcgag
atctgcatccgcggcccgcaggtgatggccggctactggaaccgcccggacgagaccgcc
aaggtcatgacgtccgacggcttcttccgctccggcgacgtgggcatcatggacgagcgc
ggctacatcaagatcgtggaccgcaagaaggacatgatcctggtgtcgggcttcaacgtc
tacccgaacgagatcgagcaggtcgtcaacctccatcccggcgtgctcgagtgcgcggcc
atcggcgtgccggatgccaagtcgggcgaagcggtcaagctgttcgtcgtcaagaaggac
ccgacgctcaccgaggacgacctgatggcctattgccgcgacaacttcaccggctacaag
cgtccgaagtacatcgagttccgcgacgagctgcccaagagcaacgtcggcaagatcctg
cggcgcgagctgaggagcagcagcaactga
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