Caldimonas thermodepolymerans: IS481_17160
Help
Entry
IS481_17160 CDS
T06911
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_17160
Transporters [BR:
sthm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IS481_17160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
OEP
HlyD_2
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QPC31422
LinkDB
All DBs
Position
complement(3629345..3630559)
Genome browser
AA seq
404 aa
AA seq
DB search
MAFRVSPLVRNVLLAAVVAVAAFAGWRYYAARTAQPTYVTAEVRRGAIEDTVLATGTLMA
YKQVNVGAQVSGQVKSLKVALGDRVKKGQLVAEIDSMTQRNALLNAEAALANVRAQLRSA
EAQLEQQRLTLRRQEQMRAADATSQADLEAAQAAFRTSQANVEALKAQVEQARISLETAK
VNLGYTQITSPIDGQVVAVVTEEGTTVNANQSAPTIIIVAQTDVMTVKASISEADVVTVK
PGQRVYFTVLGEPEHRYEATLRTIEPATDAIASSSSGGAGGSSSSSATSATAIYYNGLFD
VPNPDGKLRISMTANVHIVRGEARDALIIPSSALGAVQGDGRRVVKVLDAQGRVQERLVR
VGMDNNVQAQVLEGLNEGEKVITGTAAPASAPQGGQPMRMPRRL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcattccgtgtttctcccctcgtacgcaacgtcctgctggccgccgtcgtcgcggtg
gccgccttcgccggctggcgctactacgccgcccgcacggcgcaaccgacctacgtcacg
gccgaggtgcgccgtggcgcgatcgaggacaccgtgctggccaccggcacgctgatggcc
tacaagcaggtcaacgtcggcgcgcaggtgtccggccaggtcaagtcgctcaaggtcgcg
ctgggcgaccgcgtgaagaagggccagctggtcgccgagatcgactcgatgacccagcgc
aacgcgttgctcaacgccgaggcggcgctggccaacgtgcgcgcgcagctgcgctcggcc
gaggcccagctcgagcagcagcgcctgacgctgcgccgccaggagcagatgcgcgcggcc
gacgccacctcgcaggcggacctcgaagcggcgcaggcggcgttccgcaccagccaggcc
aacgtcgaggcgctcaaggcccaggtcgagcaggcgcgcatcagcctggagaccgccaag
gtcaacctcggctacacgcagatcacctcgccgatcgacggccaggtggtggcggtcgtc
accgaggagggcaccacggtcaacgccaaccagtcggccccgaccatcatcatcgtcgcg
cagaccgacgtgatgaccgtcaaggcatcgatctccgaggccgacgtggtcaccgtcaag
ccgggccagcgcgtgtacttcaccgtgctgggcgagcccgagcaccgctatgaagccacg
ctgcgcaccatcgagccggccaccgacgcgatcgccagcagcagctccggcggcgcaggc
ggcagctcgtccagcagcgcgaccagcgccacggcgatctactacaacggcctgttcgac
gtgcccaacccggacggcaagctgcgcatctcgatgacggccaacgtgcacatcgtgcgc
ggcgaggcgcgcgatgcgctgatcatcccgtcctcggcgctgggcgcagtgcagggtgac
ggccgccgcgtggtcaaggtgctcgacgcgcaggggcgcgtgcaggagcgcctggtgcgc
gtgggcatggacaacaacgtgcaggcccaggtgctcgaaggcctgaacgaaggcgagaag
gtcatcaccggcaccgccgccccggccagcgccccgcaaggcgggcagccgatgcgcatg
ccgcggaggctgtga
DBGET
integrated database retrieval system
